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scnpilot_expt_750_bf_scaffold_1038

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1038_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..143
DNA (141bp) protein (47aa)
cytochrome C biogenesis protein n=1 Tax=Afipia birgiae RepID=UPI0002DE6B31
Cytochrome c-type biogenesis protein CcmI {ECO:0000313|EMBL:EKS42041.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia b
cycH; cytochrome c-type biogenesis protein CycH
scnpilot_expt_750_bf_scaffold_1038_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211..429
DNA (219bp) protein (73aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHA4_9BRAD
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
cytochrome c-type biogenesis protein CcmE
scnpilot_expt_750_bf_scaffold_1038_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

463..681
DNA (219bp) protein (73aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHA4_9BRAD
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
ccmE; cytochrome c-type biogenesis protein CcmE
scnpilot_expt_750_bf_scaffold_1038_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

678..2669
DNA (1992bp) protein (664aa)
Cytochrome c-type biogenesis protein CycK n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUI8_9BRAD rbh
Cytochrome c-type biogenesis protein CycK {ECO:0000313|EMBL:EKS42043.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia b
cytochrome c-type biogenesis protein CcmF
scnpilot_expt_750_bf_scaffold_1038_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2674..3027
DNA (354bp) protein (118aa)
cytochrome C biogenesis protein CcmH n=1 Tax=Afipia birgiae RepID=UPI0002F5EF44
Uncharacterized protein {ECO:0000313|EMBL:EKS42044.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
cytochrome C biogenesis protein CcmH
scnpilot_expt_750_bf_scaffold_1038_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3281..4864
DNA (1584bp) protein (528aa)
Protease Do n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PWV1_9BRAD rbh
Protease Do {ECO:0000313|EMBL:EKS42813.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
htrA; serine protease DO-like precursor
scnpilot_expt_750_bf_scaffold_1038_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5162..5887
DNA (726bp) protein (242aa)
Two-component regulatory system response regulator n=2 Tax=Bradyrhizobiaceae RepID=F7QLG1_9BRAD rbh
Two-component regulatory system response regulator {ECO:0000313|EMBL:EGP07814.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrh
two component transcriptional regulator
scnpilot_expt_750_bf_scaffold_1038_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5895..7328
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHA9_9BRAD rbh
periplasmic sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_1038_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7337..10315
DNA (2979bp) protein (993aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUJ2_9BRAD rbh
scnpilot_expt_750_bf_scaffold_1038_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10155..12602)
DNA (2448bp) protein (816aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMM3_9BRAD rbh
multi-sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_1038_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12933..14300)
DNA (1368bp) protein (456aa)
cation diffusion facilitator family transporter n=1 Tax=Afipia birgiae RepID=UPI0003040876 rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EKS42050.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af
cation diffusion facilitator family transporter
scnpilot_expt_750_bf_scaffold_1038_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14401..15369)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PPT8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42819.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
putative NADPH quinone oxidoreductase
scnpilot_expt_750_bf_scaffold_1038_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15541..18009
DNA (2469bp) protein (823aa)
MFS transporter n=1 Tax=Afipia birgiae RepID=UPI00030F51BE rbh
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter {ECO:0000313|EMBL:EKS42053.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
MFS family transporter
scnpilot_expt_750_bf_scaffold_1038_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18034..18822
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMM6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42054.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
enoyl-CoA hydratase/isomerase
scnpilot_expt_750_bf_scaffold_1038_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18830..19954)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PR96_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42055.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1038_16
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20163..21896
DNA (1734bp) protein (578aa)
sodium:proton antiporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003698626 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49548.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
putative potassium efflux transporter YbaL rbh
scnpilot_expt_750_bf_scaffold_1038_17
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22020..22280
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMS6_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06394.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_expt_750_bf_scaffold_1038_18
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22774..23622
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQ54_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05587.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograds
scnpilot_expt_750_bf_scaffold_1038_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24322..24630
DNA (309bp) protein (103aa)
DNA-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI00037F0F86
SpoVT/AbrB-like protein
SpoVT/AbrB-like {ECO:0000313|EMBL:ABE39297.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustr
scnpilot_expt_750_bf_scaffold_1038_20
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24722..24979)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRM2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57682.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1038_21
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25191..25658)
DNA (468bp) protein (156aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUE1_NITWN
N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABA04100.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
scnpilot_expt_750_bf_scaffold_1038_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25646..25912)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1D6_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ33950.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
scnpilot_expt_750_bf_scaffold_1038_23
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26320..28464
DNA (2145bp) protein (715aa)
ParB-like nuclease n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNN2_NITWN rbh
ParB-like nuclease {ECO:0000313|EMBL:ABA06109.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (
ParB-like nuclease rbh
scnpilot_expt_750_bf_scaffold_1038_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28590..28928
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BKM0_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06303.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_1038_25
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28925..29296
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHL8_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06304.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_1038_26
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29356..29526
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:EAQ33391.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
scnpilot_expt_750_bf_scaffold_1038_27
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29601..30770
DNA (1170bp) protein (390aa)
Integrase family protein n=4 Tax=Acidithiobacillus RepID=B5EL64_ACIF5
site-specific recombinase, phage integrase family
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ACK78204.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidith
scnpilot_expt_750_bf_scaffold_1038_28
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30767..31630
DNA (864bp) protein (288aa)
Integrase family protein n=3 Tax=Acidithiobacillus RepID=B5EL65_ACIF5
integrase family protein
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ACK78871.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidith
scnpilot_expt_750_bf_scaffold_1038_29
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31623..32618
DNA (996bp) protein (332aa)
Integrase family protein n=3 Tax=Acidithiobacillus RepID=B5EL66_ACIF5 rbh
site-specific recombinase, phage integrase family
Site-specific recombinase, phage integrase family protein {ECO:0000313|EMBL:EGQ60878.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae;
scnpilot_expt_750_bf_scaffold_1038_30
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32708..33034
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2Z9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33391.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
Displaying items 1-30 of 36 in total

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