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scnpilot_expt_750_bf_scaffold_1044

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1044_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..225
DNA (225bp) protein (75aa)
AraC family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002D65119
Uncharacterized protein {ECO:0000313|EMBL:EKS33434.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1044_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(400..627)
DNA (228bp) protein (76aa)
50S ribosomal protein L31 n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI25_9BRAD
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
rpmE; 50S ribosomal protein L31
scnpilot_expt_750_bf_scaffold_1044_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

789..2654
DNA (1866bp) protein (622aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NW84_9BRAD rbh
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EKS33436.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
bmrA; ABC transporter, multidrug resistance ATP-binding permease BmrA
scnpilot_expt_750_bf_scaffold_1044_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2663..3097)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6P3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37166.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
N-acetyltransferase GCN5
scnpilot_expt_750_bf_scaffold_1044_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3120..4148)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC23_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37165.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1044_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4185..5174)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8P2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37164.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1044_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5416..6177)
DNA (762bp) protein (254aa)
inositol-1-monophosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase n=2 Tax=Bradyrhizobiaceae RepID=F7QFL0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35349.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
scnpilot_expt_750_bf_scaffold_1044_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6319..7407)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3M6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37162.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1044_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7415..8086)
DNA (672bp) protein (224aa)
thiamine monophosphate synthase n=1 Tax=Afipia birgiae RepID=UPI0002E0765B rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37161.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
putative thiamine-phosphate pyrophosphorylase
scnpilot_expt_750_bf_scaffold_1044_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8180..9247)
DNA (1068bp) protein (356aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase 2 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC16_9BRAD rbh
Fructose-bisphosphate aldolase 2 {ECO:0000313|EMBL:EKS37160.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae A
scnpilot_expt_750_bf_scaffold_1044_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9304..10500)
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=666684 species="Bacteria;
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V799_9BRAD rbh
scnpilot_expt_750_bf_scaffold_1044_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10629..11636)
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10BE9 rbh
scnpilot_expt_750_bf_scaffold_1044_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11801..13528)
DNA (1728bp) protein (576aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
tktA; transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PAH2_9BRAD
scnpilot_expt_750_bf_scaffold_1044_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13992..14318
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NYE6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35342.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1044_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14315..14698
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F4A0FC
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1044_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15243..15830
DNA (588bp) protein (196aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Br
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QFK0_9BRAD rbh
scnpilot_expt_750_bf_scaffold_1044_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15831..15962
DNA (132bp) protein (44aa)
metallophosphoesterase n=1 Tax=Afipia birgiae RepID=UPI0002EA5D00
Metallophosphoesterase, MG_246/ family {ECO:0000313|EMBL:CEG09403.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
metallo-phosphoesterase
Displaying 17 items

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