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scnpilot_expt_750_bf_scaffold_1123

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1123_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..259
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D7A798
Uncharacterized protein {ECO:0000313|EMBL:EKS41174.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1123_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256..3027
DNA (2772bp) protein (924aa)
N-terminal double-transmembrane domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PS45_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50648.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
double-transmembrane region-like protein
scnpilot_expt_750_bf_scaffold_1123_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3029..5062
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEV4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41172.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1123_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5173..5562
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNT5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41170.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1123_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5658..8015
DNA (2358bp) protein (786aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK57_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41169.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
TonB-dependent receptor protein
scnpilot_expt_750_bf_scaffold_1123_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8146..8664)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PS37_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41168.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
GCN5-like N-acetyltransferase
scnpilot_expt_750_bf_scaffold_1123_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8716..8955)
DNA (240bp) protein (80aa)
NUDIX hydrolase n=1 Tax=Afipia birgiae RepID=UPI0002E48FCD
Uncharacterized protein {ECO:0000313|EMBL:EKS41167.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
NUDIX hydrolase
scnpilot_expt_750_bf_scaffold_1123_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8976..9125)
DNA (150bp) protein (50aa)
NUDIX hydrolase n=1 Tax=Afipia birgiae RepID=UPI0002E48FCD
Nudix hydrolase {ECO:0000313|EMBL:EGP08686.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
NUDIX hydrolase
scnpilot_expt_750_bf_scaffold_1123_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9231..10121
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI00_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41166.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
putative phosphohydrolase
scnpilot_expt_750_bf_scaffold_1123_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10118..10678)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZJ1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32820.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1123_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10856..11062)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000304BF71
Uncharacterized protein {ECO:0000313|EMBL:EIG58277.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1123_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11092..12732)
DNA (1641bp) protein (547aa)
aceA; isocitrate lyase AceA (EC:4.1.3.1)
Isocitrate lyase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NR36_9BRAD rbh
Isocitrate lyase {ECO:0000313|EMBL:EKS32817.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.
scnpilot_expt_750_bf_scaffold_1123_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12879..14315
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PS31_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41163.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
XRE family transcriptional regulator rbh
scnpilot_expt_750_bf_scaffold_1123_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14422..15663
DNA (1242bp) protein (414aa)
Lytic murein transglycosylase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NUK5_9BRAD rbh
Lytic murein transglycosylase {ECO:0000313|EMBL:EKS32816.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensi
lytic murein transglycosylase
scnpilot_expt_750_bf_scaffold_1123_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15766..16266
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNS7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41160.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1123_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16523..17617
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK45_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41159.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
oxidoreductase
scnpilot_expt_750_bf_scaffold_1123_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17699..17893)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F7DC56
Uncharacterized protein {ECO:0000313|EMBL:EKS41158.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1123_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18281..18706)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PET6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41157.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
thioesterase
scnpilot_expt_750_bf_scaffold_1123_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18734..20266)
DNA (1533bp) protein (511aa)
fatty-acid oxidation protein subunit alpha n=1 Tax=Afipia birgiae RepID=UPI0002F0945A
Uncharacterized protein {ECO:0000313|EMBL:EKS32811.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
3-hydroxyacyl-CoA dehydrogenase
scnpilot_expt_750_bf_scaffold_1123_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20472..20729
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ7_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1123_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20768..21232)
DNA (465bp) protein (155aa)
ptsN; PTS system, nitrogen regulatory IIA component ptsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
PTS system, nitrogen regulatory IIA component ptsN n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ6_PHEZH
ptsN; PTS system, nitrogen regulatory IIA component ptsN
Displaying 21 items

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