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scnpilot_expt_750_bf_scaffold_1189

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1189_1
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)
UPI0003CDEB91 related cluster n=1 Tax=unknown RepID=UPI0003CDEB91
DoxX family protein
Membrane protein {ECO:0000313|EMBL:ESY82077.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC22
scnpilot_expt_750_bf_scaffold_1189_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317..1144)
DNA (828bp) protein (276aa)
Porin, opacity type n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N7_9BRAD rbh
Porin, opacity type {ECO:0000313|EMBL:EFI51247.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
porin, opacity type rbh
scnpilot_expt_750_bf_scaffold_1189_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1538..2551)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5U1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36826.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
major facilitator transporter
scnpilot_expt_750_bf_scaffold_1189_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2898..4247)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=883078 species="Bacteri
Phosphoglucosamine mutase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2P1_9BRAD rbh
glmM; phosphoglucosamine mutase
scnpilot_expt_750_bf_scaffold_1189_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4455..4670)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FB6508
Uncharacterized protein {ECO:0000313|EMBL:EGP10143.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1189_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4734..4898)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7U7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36829.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_expt_750_bf_scaffold_1189_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4986..6161
DNA (1176bp) protein (392aa)
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PB60_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36830.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_expt_750_bf_scaffold_1189_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6205..6837)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EBBE74
Uncharacterized protein {ECO:0000313|EMBL:ERF80697.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_expt_750_bf_scaffold_1189_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6934..7236)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P734_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35460.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
scnpilot_expt_750_bf_scaffold_1189_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7377..8210)
DNA (834bp) protein (278aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF54_9BRAD rbh
aroE; shikimate 5-dehydrogenase
scnpilot_expt_750_bf_scaffold_1189_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8238..9566)
DNA (1329bp) protein (443aa)
Sulfate permease n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEQ4_9BRAD
Sulfate permease {ECO:0000313|EMBL:EKS36833.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sulfate transporter family protein
scnpilot_expt_750_bf_scaffold_1189_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9607..9846)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF56_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP10150.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1189_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9972..12053)
DNA (2082bp) protein (694aa)
Translation elongation factor G n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P3Z1_9BRAD rbh
Translation elongation factor G {ECO:0000313|EMBL:EKS35464.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelanden
small GTP-binding protein
scnpilot_expt_750_bf_scaffold_1189_14
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12422..12904)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P739_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP10153.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1189_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13070..13600)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P1Y3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35466.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1189_16
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13764..14219)
DNA (456bp) protein (152aa)
GntR domain protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GGM0_METPE
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ACL16275.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula pa
scnpilot_expt_750_bf_scaffold_1189_17
unknown

Not on your lists

14537..14728
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 17 items

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