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scnpilot_expt_750_bf_scaffold_1298

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1298_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..679
DNA (678bp) protein (226aa)
Glycerol-3-phosphate ABC transporter n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKJ7_9BRAD
Glycerol-3-phosphate ABC transporter {ECO:0000313|EMBL:EGP08366.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bac
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein
scnpilot_expt_750_bf_scaffold_1298_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

725..1648
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030AD25A rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42532.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
sugar ABC transporter permease
scnpilot_expt_750_bf_scaffold_1298_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1754..2425
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PVY0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42533.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
ABC transporter permease
scnpilot_expt_750_bf_scaffold_1298_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2425..3261
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKJ8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP08367.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
Metal-dependent hydrolase
scnpilot_expt_750_bf_scaffold_1298_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3578..4672
DNA (1095bp) protein (365aa)
signal peptide protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000365A50E
Signal peptide protein {ECO:0000313|EMBL:KIZ47123.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pa
hypothetical protein
scnpilot_expt_750_bf_scaffold_1298_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4740..5000
DNA (261bp) protein (87aa)
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43042.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
scnpilot_expt_750_bf_scaffold_1298_7
unknown

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comp(5575..5871)
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1298_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6278..6811
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHB9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42057.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter
scnpilot_expt_750_bf_scaffold_1298_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6811..7689
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUK0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42058.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
High-affinity branched-chain amino acid transporter permease
scnpilot_expt_750_bf_scaffold_1298_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7689..8729
DNA (1041bp) protein (347aa)
Branched-chain amino acid transport system permease n=2 Tax=Bradyrhizobiaceae RepID=F7QRJ8_9BRAD rbh
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EGP06209.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyr
livM; high-affinity branched-chain amino acid transport system permease
scnpilot_expt_750_bf_scaffold_1298_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8750..9931
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRA1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42060.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
branched-chain amino acid ABC transporter binding protein
scnpilot_expt_750_bf_scaffold_1298_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9931..10749
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKF2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42061.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
branched-chain amino acid ABC transporter ATPase
scnpilot_expt_750_bf_scaffold_1298_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10762..12564
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHC4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42062.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
AMP-dependent synthetase/ligase
scnpilot_expt_750_bf_scaffold_1298_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12653..12754
DNA (102bp) protein (34aa)
Uncharacterized protein {ECO:0000313|EMBL:EKS36733.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_expt_750_bf_scaffold_1298_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12873..14495
DNA (1623bp) protein (541aa)
ATP-binding protein of ABC transporter n=2 Tax=Bradyrhizobiaceae RepID=F7QLI7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42841.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_1298_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14526..14996)
DNA (471bp) protein (157aa)
Transcriptional regulator, MarR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDR8_XANP2
Transcriptional regulator {ECO:0000313|EMBL:GAN77703.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera
MarR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1298_17
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15182..16204)
DNA (1023bp) protein (341aa)
aliphatic sulfonate ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003627726 rbh
Putative Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein {ECO:0000313|EMBL:CCD91101.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
aliphatic sulfonates ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_1298_18
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16240..16572)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037F2B59
Uncharacterized protein {ECO:0000313|EMBL:EJZ32661.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_expt_750_bf_scaffold_1298_19
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16569..16922)
DNA (354bp) protein (118aa)
sulfonate ABC transporter ATP-binding lipoprotein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000381E5ED
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EJZ32660.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_1298_20
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17271..18077)
DNA (807bp) protein (269aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036B52C1 rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCD91104.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
putative taurine ABC transporter permease protein
scnpilot_expt_750_bf_scaffold_1298_21
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18074..18652)
DNA (579bp) protein (193aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036AC9E1 rbh
Putative taurine ABC transporter permease protein {ECO:0000313|EMBL:EJZ32658.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
putative taurine ABC transporter permease protein
scnpilot_expt_750_bf_scaffold_1298_22
unknown

Not on your lists

comp(18687..18818)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1298_23
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18925..19611)
DNA (687bp) protein (229aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SA79_9BRAD rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCD91106.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Br
short-chain dehydrogenase/reductase SDR
scnpilot_expt_750_bf_scaffold_1298_24
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19617..20114)
DNA (498bp) protein (166aa)
Cupin 2, conserved barrel n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SA80_9BRAD rbh
Cupin 2, conserved barrel {ECO:0000313|EMBL:CCD91107.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
cupin 2 domain-containing protein
scnpilot_expt_750_bf_scaffold_1298_25
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20104..20898)
DNA (795bp) protein (265aa)
GntR domain protein (Modular protein) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SA81_9BRAD rbh
GntR domain protein (Modular protein) {ECO:0000313|EMBL:CCD91108.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brad
putative transcriptional regulatory protein GntR family
scnpilot_expt_750_bf_scaffold_1298_26
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21352..21813)
DNA (462bp) protein (154aa)
ArsR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002D35135
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EGP06402.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae b
transcriptional regulator
scnpilot_expt_750_bf_scaffold_1298_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21917..24271
DNA (2355bp) protein (785aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brad
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1M9_9BRAD rbh
transketolase
Displaying 27 items

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