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scnpilot_expt_750_bf_scaffold_1301

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1301_1
unknown

Not on your lists

comp(18..767)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037EE0FA
Uncharacterized protein {ECO:0000313|EMBL:CPR22527.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
N-acetylmuramoyl-L-alanine amidase
scnpilot_expt_750_bf_scaffold_1301_2
bacterium YEK0313, Bacteria

Not on your lists

comp(767..1462)
DNA (696bp) protein (232aa)
DnaJ domain protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1H8_POLGS
DnaJ-like protein DjlA {ECO:0000313|EMBL:CEJ15398.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
DnaJ domain-containing protein
scnpilot_expt_750_bf_scaffold_1301_3
unknown

Not on your lists

comp(1628..3454)
DNA (1827bp) protein (609aa)
Aminopeptidase {ECO:0000313|EMBL:CPR22560.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CPR22560.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicr
Peptidase M24 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7D3_9RHIZ rbh
peptidase M24
scnpilot_expt_750_bf_scaffold_1301_4
unknown

Not on your lists

3730..3981
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1301_5
unknown

Not on your lists

4098..4325
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1301_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4449..6053
DNA (1605bp) protein (535aa)
Oxidoreductase, GMC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMA1_9PROT rbh
Oxidoreductase, GMC family protein {ECO:0000313|EMBL:EDP65705.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
glucose-methanol-choline oxidoreductase
scnpilot_expt_750_bf_scaffold_1301_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6407..7162)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMB8_9PROT
Short-chain dehydrogenase {ECO:0000313|EMBL:EKE75547.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibacul
oxidoreductase
scnpilot_expt_750_bf_scaffold_1301_8
unknown

Not on your lists

7439..7639
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1301_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7661..9016)
DNA (1356bp) protein (452aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RJ96_9RHIZ
tRNA(Ile)-lysidine synthetase
scnpilot_expt_750_bf_scaffold_1301_10
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9074..9583)
DNA (510bp) protein (170aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZLQ2_METPB
carbon monoxide dehydrogenase subunit G
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:ACB81702.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source
scnpilot_expt_750_bf_scaffold_1301_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9602..10258)
DNA (657bp) protein (219aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
phosphoglycerate mutase n=1 Tax=Variovorax paradoxus RepID=UPI00037A27EB
phosphoglycerate mutase
scnpilot_expt_750_bf_scaffold_1301_12
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10270..10587)
DNA (318bp) protein (106aa)
acetyl-CoA C-acyltransferase family protein (EC:2.3.1.16)
acetyl-CoA acetyltransferase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FE4DDF
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KIF82549.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspiril
scnpilot_expt_750_bf_scaffold_1301_13
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10592..11386)
DNA (795bp) protein (265aa)
Acetyl-CoA acetyltransferase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZYN2_DEIPD
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFZ66758.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridil
scnpilot_expt_750_bf_scaffold_1301_14
uncultured alpha proteobacterium HF0130_20P23, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11604..12125
DNA (522bp) protein (174aa)
Transcriptional regulators n=1 Tax=uncultured alpha proteobacterium HF0130_20P23 RepID=E0XT89_9PROT
Transcriptional regulators {ECO:0000313|EMBL:ADI17630.1}; TaxID=710809 species="Bacteria; Proteobacteria; Alphaproteobacteria; environmental samples.;" source="uncultured alpha proteobacterium HF0130_
transcriptional regulator
scnpilot_expt_750_bf_scaffold_1301_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12128..13216
DNA (1089bp) protein (363aa)
Putative efflux pump protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIT9_9PROT rbh
Putative efflux pump protein {ECO:0000313|EMBL:EDP66570.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
secretion protein HlyD
Displaying 15 items

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