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scnpilot_expt_750_bf_scaffold_1550

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1550_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..176)
DNA (174bp) protein (58aa)
XRE family transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAE8_9RHIZ
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AGK59978.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hypho
scnpilot_expt_750_bf_scaffold_1550_2
bacterium YEK0313, Bacteria

Not on your lists

472..2079
DNA (1608bp) protein (536aa)
Propionyl-CoA carboxylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWW1_PARL1
propionyl-CoA carboxylase
Methylmalonyl-CoA carboxyltransferase 12S subunit {ECO:0000313|EMBL:CEJ13556.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_expt_750_bf_scaffold_1550_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2092..2478)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J5K0_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB64312.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp.
scnpilot_expt_750_bf_scaffold_1550_4
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2700..3977)
DNA (1278bp) protein (426aa)
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DD9F7C rbh
scnpilot_expt_750_bf_scaffold_1550_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4134..5135)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGR4_9RHIZ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49723.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
scnpilot_expt_750_bf_scaffold_1550_6
unknown

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comp(5387..6160)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C9D78
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
polyphenol oxidase
scnpilot_expt_750_bf_scaffold_1550_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6202..6459)
DNA (258bp) protein (86aa)
glutaredoxin n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003029FAF
grxC; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:BAF90294.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strai
scnpilot_expt_750_bf_scaffold_1550_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6587..7399)
DNA (813bp) protein (271aa)
Phosphoribosyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9B0_9RHIZ
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AHB47223.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium
scnpilot_expt_750_bf_scaffold_1550_9
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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7564..8418
DNA (855bp) protein (285aa)
Ion transporter n=1 Tax=Thauera sp. 27 RepID=N6YMU1_9RHOO
Ion transporter {ECO:0000313|EMBL:ENO81324.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
ion transporter
scnpilot_expt_750_bf_scaffold_1550_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8498..9121
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DCB326
Amidohydrolase {ECO:0000313|EMBL:KJB94050.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KAC
peptidase M20D, amidohydrolase
scnpilot_expt_750_bf_scaffold_1550_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9118..9606
DNA (489bp) protein (163aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Amidohydrolase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5G5_9PROT
amidohydrolase
scnpilot_expt_750_bf_scaffold_1550_12
bacterium YEK0313, Bacteria

Not on your lists

9646..10581
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U8S2_METS4
3-keto-5-aminohexanoate cleavage enzyme {ECO:0000313|EMBL:CEJ12457.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1550_13
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10692..11150
DNA (459bp) protein (153aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003743E4C
Displaying 13 items

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