ggKbase home page

scnpilot_expt_750_bf_scaffold_788

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_788_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..794)
DNA (792bp) protein (264aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHA4_9BRAD
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=709797 species="Bacteria; Proteobac
hslU; ATP-dependent hsl protease ATP-binding subunit HslU
scnpilot_expt_750_bf_scaffold_788_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(834..1439)
DNA (606bp) protein (202aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002ED7931 rbh
UPF0314 protein HMPREF9695_04610 {ECO:0000256|HAMAP-Rule:MF_01514}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broome
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1436..1987)
DNA (552bp) protein (184aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=883078 specie
ATP-dependent protease subunit HslV n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZU7_9BRAD rbh
ATP-dependent protease peptidase subunit
scnpilot_expt_750_bf_scaffold_788_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2194..2787
DNA (594bp) protein (198aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2H6_9BRAD rbh
scnpilot_expt_750_bf_scaffold_788_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2894..3397
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8L9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34703.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3394..4044
DNA (651bp) protein (217aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1W8_9BRAD rbh
hisH; imidazole glycerol phosphate synthase subunit HisH
scnpilot_expt_750_bf_scaffold_788_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4041..4781
DNA (741bp) protein (247aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QH98_9BRAD rbh
scnpilot_expt_750_bf_scaffold_788_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4781..5557
DNA (777bp) protein (259aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Bradyrhizobiaceae RepID=F7QH97_9BRAD rbh
scnpilot_expt_750_bf_scaffold_788_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5641..5964
DNA (324bp) protein (108aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
phosphoribosyl-ATP pyrophosphatase n=1 Tax=Afipia birgiae RepID=UPI0002F378CF
scnpilot_expt_750_bf_scaffold_788_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6014..6973
DNA (960bp) protein (320aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:000025
pantothenate kinase (EC:2.7.1.33)
pantothenate kinase n=1 Tax=Afipia birgiae RepID=UPI0002F64408 rbh
scnpilot_expt_750_bf_scaffold_788_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7141..8196)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1X4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34709.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8296..10545)
DNA (2250bp) protein (750aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NUA1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33897.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
two-component hybrid sensor and regulator
scnpilot_expt_750_bf_scaffold_788_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10683..11147)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXJ6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33896.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11310..12848)
DNA (1539bp) protein (513aa)
Mg chelatase-like protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWL2_9BRAD rbh
Mg chelatase-like protein {ECO:0000313|EMBL:EKS34712.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 497
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13199..13849
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E29EA1
Uncharacterized protein {ECO:0000313|EMBL:EFI52699.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13879..14721)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E44C75 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP09364.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14899..17103)
DNA (2205bp) protein (735aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003761FAB rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH77438.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
siderophore receptor protein
scnpilot_expt_750_bf_scaffold_788_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17262..18203)
DNA (942bp) protein (314aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:
Glutathione synthetase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXH9_9BRAD rbh
glutathione synthetase
scnpilot_expt_750_bf_scaffold_788_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18506..18973)
DNA (468bp) protein (156aa)
UPF0102 protein HMPREF9696_02995 n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2F2_9BRAD
UPF0102 protein CSIRO_0900 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18963..19910)
DNA (948bp) protein (316aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
rRNA small subunit methyltransferase I n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QH72_9BRAD rbh
hypothetical protein
scnpilot_expt_750_bf_scaffold_788_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20120..20485
DNA (366bp) protein (122aa)
ethanolamine utilization protein EutM n=1 Tax=Afipia birgiae RepID=UPI000372149B
Uncharacterized protein {ECO:0000313|EMBL:EKS34718.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
extracellular ligand-binding receptor
Displaying 21 items

View Taxonomy