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scnpilot_expt_750_bf_scaffold_866

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_866_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68..1363
DNA (1296bp) protein (432aa)
O-acetylhomoserine sulfhydrylase/ O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:EGP08483.1}; EC=2.5.1.48 {ECO:0000313|EMBL:EGP08483.1};; EC=2.5.1.49 {ECO:0000313|EMBL:EGP08483.1};; TaxID=709797
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrylase/ O-succinylhomoserine sulfhydrylase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKW4_9BRAD rbh
scnpilot_expt_750_bf_scaffold_866_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1367..2173
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PP97_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42644.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2177..3397)
DNA (1221bp) protein (407aa)
Glutamate dehydrogenase n=2 Tax=Bradyrhizobiaceae RepID=F7QKW2_9BRAD rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6
Glu/Leu/Phe/Val dehydrogenase
scnpilot_expt_750_bf_scaffold_866_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3525..4232)
DNA (708bp) protein (236aa)
Branched-chain amino acid transport ATP-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QKW1_9BRAD rbh
Branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:EGP08480.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Br
ABC transporter-like protein rbh
scnpilot_expt_750_bf_scaffold_866_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4222..4956)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGV1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41877.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter-like protein rbh
scnpilot_expt_750_bf_scaffold_866_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4953..5753)
DNA (801bp) protein (267aa)
Branched-chain amino acid transport ATP-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QKV9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42640.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
inner-membrane translocator
scnpilot_expt_750_bf_scaffold_866_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5904..6782)
DNA (879bp) protein (293aa)
High-affinity branched-chain amino acid transport system permease n=2 Tax=Bradyrhizobiaceae RepID=F7QKV8_9BRAD rbh
High-affinity branched-chain amino acid transport system permease {ECO:0000313|EMBL:EGP08477.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;"
inner-membrane translocator
scnpilot_expt_750_bf_scaffold_866_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6895..8142)
DNA (1248bp) protein (416aa)
High-affinity leucine-specific transport system, periplasmic binding protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKV7_9BRAD rbh
High-affinity leucine-specific transport system, periplasmic binding protein {ECO:0000313|EMBL:EGP08476.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo
extracellular ligand-binding receptor
scnpilot_expt_750_bf_scaffold_866_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..9024)
DNA (825bp) protein (275aa)
UPF0317 protein HMPREF9695_00965 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PU43_9BRAD rbh
UPF0317 protein HMPREF9695_00965 {ECO:0000256|HAMAP-Rule:MF_01830}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broome
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9139..10101
DNA (963bp) protein (321aa)
LysR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000371DDF3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41872.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_866_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10055..10309)
DNA (255bp) protein (85aa)
catalase n=1 Tax=Afipia birgiae RepID=UPI0002DFC54E
Uncharacterized protein {ECO:0000313|EMBL:EKS41871.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10501..11259
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PP85_9BRAD rbh
Putative integral membrane protein {ECO:0000313|EMBL:EGP08472.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11256..12053)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PW77_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42633.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
aldo/keto reductase
scnpilot_expt_750_bf_scaffold_866_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12016..13143)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAP3_9BRAD rbh
Putative secreted hydrolase {ECO:0000313|EMBL:CEG09846.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13133..15589)
DNA (2457bp) protein (819aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAP4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI49971.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15589..16242)
DNA (654bp) protein (218aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAP5_9BRAD rbh
Putative ABC transporter ATP-binding protein/MT1014 {ECO:0000313|EMBL:CEG09843.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_866_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16470..19556)
DNA (3087bp) protein (1029aa)
Acriflavin resistance protein n=2 Tax=Bradyrhizobiaceae RepID=F7QKU8_9BRAD rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS42628.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
acriflavin resistance protein
scnpilot_expt_750_bf_scaffold_866_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19578..20699)
DNA (1122bp) protein (374aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bradyrhizobiaceae RepID=K8PIZ9_9BRAD rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS42627.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
secretion protein HlyD
scnpilot_expt_750_bf_scaffold_866_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20773..21474)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PU34_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41863.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
TetR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_866_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21755..23770
DNA (2016bp) protein (672aa)
TRAP-like transport system fused permease component n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKU4_9BRAD rbh
TRAP-like transport system fused permease component {ECO:0000313|EMBL:EGP08463.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyr
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23795..24763
DNA (969bp) protein (323aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Afipia birgiae RepID=UPI00030D7DBA rbh
TAXI family TRAP transporter solute receptor {ECO:0000313|EMBL:EKS41861.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi
periplasmic protein
scnpilot_expt_750_bf_scaffold_866_22
unknown

Not on your lists

comp(24760..24855)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_866_23
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24964..26208)
DNA (1245bp) protein (415aa)
N-acetylglucosamine-1-phosphate uridyltransferase n=1 Tax=Afipia birgiae RepID=UPI00036FA130 rbh
Oxidoreductase {ECO:0000313|EMBL:EGP08461.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
FAD dependent oxidoreductase rbh
scnpilot_expt_750_bf_scaffold_866_24
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26390..27658
DNA (1269bp) protein (423aa)
allantoate amidohydrolase (EC:3.5.1.87)
Hydantoinase/carbamoylase family amidase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PW62_9BRAD rbh
Hydantoinase/carbamoylase family amidase {ECO:0000313|EMBL:EKS42618.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia cl
scnpilot_expt_750_bf_scaffold_866_25
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27801..29843
DNA (2043bp) protein (681aa)
peptidase S9 n=1 Tax=Afipia birgiae RepID=UPI0002EAD30A rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42617.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
protease II
scnpilot_expt_750_bf_scaffold_866_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29995..30834
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PU25_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41853.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30810..31181
DNA (372bp) protein (124aa)
Major facilitator superfamily protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKT2_9BRAD
Major facilitator superfamily protein {ECO:0000313|EMBL:EGP08451.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae ba
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31379..31918)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGT0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41852.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_866_29
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32114..33151)
DNA (1038bp) protein (346aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EGP08449.1}; EC=1.1.1.95 {ECO:0000313|EMBL:EGP08449.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
D-3-phosphoglycerate dehydrogenase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKT0_9BRAD rbh
putative phosphoglycerate dehydrogenase
scnpilot_expt_750_bf_scaffold_866_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33264..33977
DNA (714bp) protein (238aa)
demethylmenaquinone methyltransferase n=1 Tax=Afipia birgiae RepID=UPI0003167CA2 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41850.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
Displaying items 1-30 of 42 in total

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