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scnpilot_expt_750_bf_scaffold_888

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_888_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1064)
DNA (1062bp) protein (354aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PK75_9BRAD rbh
plsX; phosphate acyltransferase PlsX
scnpilot_expt_750_bf_scaffold_888_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1262..1861)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIW7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38293.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_888_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1858..2412)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC51_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38294.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
basic FGF-repressed Zic binding protein
scnpilot_expt_750_bf_scaffold_888_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2553..3029
DNA (477bp) protein (159aa)
membrane protein SmpA n=1 Tax=Afipia birgiae RepID=UPI000312BC9D
Uncharacterized protein {ECO:0000313|EMBL:EKS38295.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_888_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3189..4190
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9W0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38296.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_888_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4261..4413)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6T9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07058.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_888_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4604..6718)
DNA (2115bp) protein (705aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PDH5_9BRAD rbh
hppA; membrane-bound proton-translocating pyrophosphatase
scnpilot_expt_750_bf_scaffold_888_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6944..7921)
DNA (978bp) protein (326aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiamine-monophosphate kinase (EC:2.7.4.16) rbh
Thiamine-monophosphate kinase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC56_9BRAD rbh
scnpilot_expt_750_bf_scaffold_888_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8004..8501)
DNA (498bp) protein (166aa)
transcription antitermination protein NusB n=1 Tax=Afipia birgiae RepID=UPI0002DA75E0 rbh
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=883078 species="Bacteria; Prote
nusB; transcription antitermination protein NusB
scnpilot_expt_750_bf_scaffold_888_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8498..8992)
DNA (495bp) protein (165aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Bradyrhizobiaceae RepID=F7QNX9_9BRAD rbh
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
scnpilot_expt_750_bf_scaffold_888_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9104..10966)
DNA (1863bp) protein (621aa)
putative Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II (EC:6.2.1.26) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38302.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_expt_750_bf_scaffold_888_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11021..11632)
DNA (612bp) protein (204aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC60_9BRAD rbh
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EKS38304.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae
scnpilot_expt_750_bf_scaffold_888_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11633..12778)
DNA (1146bp) protein (382aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGX1_9BRAD rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clev
scnpilot_expt_750_bf_scaffold_888_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12775..13260)
DNA (486bp) protein (162aa)
Transcriptional repressor NrdR n=2 Tax=Bradyrhizobiaceae RepID=F7QNY3_9BRAD rbh
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
transcriptional regulator NrdR
scnpilot_expt_750_bf_scaffold_888_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13367..14683)
DNA (1317bp) protein (439aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U6_9BRAD rbh
glyA; serine hydroxymethyltransferase
scnpilot_expt_750_bf_scaffold_888_16
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15265..15756)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QGW4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG59020.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
hypothetical protein
scnpilot_expt_750_bf_scaffold_888_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16030..16542)
DNA (513bp) protein (171aa)
MarR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000307F217 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38309.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
MarR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_888_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16841..17275)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFH6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38310.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_888_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17395..18453
DNA (1059bp) protein (353aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; B
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PB64_9BRAD rbh
scnpilot_expt_750_bf_scaffold_888_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18669..19271
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003177D78 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP07075.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_888_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19426..20202
DNA (777bp) protein (259aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8)
arginyl-tRNA-protein transferase n=1 Tax=Afipia birgiae RepID=UPI00035CBB16 rbh
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
Displaying 21 items

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