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scnpilot_expt_750_bf_scaffold_918

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_918_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..646)
DNA (645bp) protein (215aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIH5_9BRAD
MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:EGP09066.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobia
tonB-system energizer ExbB
scnpilot_expt_750_bf_scaffold_918_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(874..2982)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7N6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34403.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
outer membrane hemin/siderophore receptor protein
scnpilot_expt_750_bf_scaffold_918_3
unknown

Not on your lists

3133..3564
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_918_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3422..4303)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NSH4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33282.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
peptidase
scnpilot_expt_750_bf_scaffold_918_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4563..6833
DNA (2271bp) protein (757aa)
TonB-dependent siderophore receptor n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIH9_9BRAD rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EGP09070.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bact
TonB-dependent siderophore receptor
scnpilot_expt_750_bf_scaffold_918_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6959..7639
DNA (681bp) protein (227aa)
PKHD-type hydroxylase Nham_3637 {ECO:0000255|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000255|HAMAP-Rule:MF_00657};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Br
PKHD-type hydroxylase Nham_3637 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y3637_NITHX rbh
hydroxylase
scnpilot_expt_750_bf_scaffold_918_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8073..9932
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3Y9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34395.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
long-chain-fatty-acid--CoA ligase
scnpilot_expt_750_bf_scaffold_918_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9971..11173
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0Y0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34394.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
twin-arginine translocation pathway signal
scnpilot_expt_750_bf_scaffold_918_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11483..12355
DNA (873bp) protein (291aa)
Benzoate transport protein, inner-membrane translocator n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QII6_9BRAD rbh
Benzoate transport protein, inner-membrane translocator {ECO:0000313|EMBL:EGP09077.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Br
inner-membrane translocator
scnpilot_expt_750_bf_scaffold_918_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12359..13339
DNA (981bp) protein (327aa)
Benzoate transport protein, inner-membrane translocator n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QII7_9BRAD rbh
Benzoate transport protein, inner-membrane translocator {ECO:0000313|EMBL:EGP09078.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Br
inner-membrane translocator
scnpilot_expt_750_bf_scaffold_918_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13332..14099
DNA (768bp) protein (256aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002F1F0A3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34391.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter
scnpilot_expt_750_bf_scaffold_918_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14096..14806
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3Y5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34390.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter
scnpilot_expt_750_bf_scaffold_918_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15048..15557)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0X6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34389.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_expt_750_bf_scaffold_918_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15554..16456)
DNA (903bp) protein (301aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=883079 species="Bacteria; Proteobacteria; Alphapr
Shikimate kinase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0W1_9BRAD rbh
hypothetical protein
scnpilot_expt_750_bf_scaffold_918_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16615..18165
DNA (1551bp) protein (517aa)
4-hydroxybenzoate--CoA ligase n=1 Tax=Afipia birgiae RepID=UPI0002D3E634 rbh
Benzoate-CoA ligase {ECO:0000313|EMBL:EKS34387.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
benzoate-CoA ligase family
scnpilot_expt_750_bf_scaffold_918_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18317..19192
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYW8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34386.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
alpha/beta hydrolase fold protein
scnpilot_expt_750_bf_scaffold_918_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19512..21047
DNA (1536bp) protein (512aa)
Benzoyl-CoA-dihydrodiol lyase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3Y1_9BRAD
Benzoyl-CoA-dihydrodiol lyase {ECO:0000313|EMBL:EKS34385.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_918_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21178..22623
DNA (1446bp) protein (482aa)
Benzoyl-CoA oxygenase, B subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0X0_9BRAD rbh
Benzoyl-CoA oxygenase, B subunit {ECO:0000313|EMBL:EKS34384.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae A
boxB; benzoyl-CoA oxygenase subunit B
scnpilot_expt_750_bf_scaffold_918_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22745..23944
DNA (1200bp) protein (400aa)
boxA; benzoyl-CoA oxygenase subunit A (EC:1.18.1.2)
Benzoyl-CoA oxygenase/reductase, BoxA protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7L9_9BRAD rbh
Benzoyl-CoA oxygenase/reductase, BoxA protein {ECO:0000313|EMBL:EKS34383.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
scnpilot_expt_750_bf_scaffold_918_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24103..24840)
DNA (738bp) protein (246aa)
kduD; 2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Bradyrhizobiaceae RepID=F7QIJ7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33301.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
scnpilot_expt_750_bf_scaffold_918_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25088..26170)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DAFAEC rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34380.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
polysaccharide deacetylase
scnpilot_expt_750_bf_scaffold_918_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26354..27748
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0W6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34379.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
OmpA/MotB
scnpilot_expt_750_bf_scaffold_918_23
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27912..28145
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIK1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09092.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_918_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28850..29317
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYW1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34376.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
membrane protein
scnpilot_expt_750_bf_scaffold_918_25
unknown

Not on your lists

comp(29161..29778)
DNA (618bp) protein (206aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_918_26
unknown

Not on your lists

comp(29806..29904)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_918_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30126..30647
DNA (522bp) protein (174aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3X2_9BRAD
histidine kinase
scnpilot_expt_750_bf_scaffold_918_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30783..31292)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0W2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34374.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
GcrA cell cycle regulator
scnpilot_expt_750_bf_scaffold_918_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31834..33057
DNA (1224bp) protein (408aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=883078 species="Bacteria; Prot
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7L0_9BRAD rbh
scnpilot_expt_750_bf_scaffold_918_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33054..33866
DNA (813bp) protein (271aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase n=1 Tax=Afipia birgiae RepID=UPI00031F42B2
Displaying 30 items

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