ggKbase home page

scnpilot_expt_750_bf_scaffold_971

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_971_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..605)
DNA (603bp) protein (201aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
glutamate--ammonia ligase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMN4_9BRAD rbh
scnpilot_expt_750_bf_scaffold_971_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1286..2221)
DNA (936bp) protein (312aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=883078 species="Bacteria; Proteobacter
glutaminase (EC:3.5.1.2)
glutaminase n=1 Tax=Afipia birgiae RepID=UPI000317E94B rbh
scnpilot_expt_750_bf_scaffold_971_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2306..3784)
DNA (1479bp) protein (493aa)
Exopolyphosphatase {ECO:0000313|EMBL:EGP08051.1}; EC=3.6.1.11 {ECO:0000313|EMBL:EGP08051.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" sou
Exopolyphosphatase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QM48_9BRAD rbh
Ppx/GppA phosphatase
scnpilot_expt_750_bf_scaffold_971_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3804..5990)
DNA (2187bp) protein (729aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
ppk; polyphosphate kinase Ppk (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Afipia clevelandensis ATCC 49720 PF69_9BRAD">RepID=K8PF69_9BRAD rbh
scnpilot_expt_750_bf_scaffold_971_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6130..6366)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PL01_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40200.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_971_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6360..6713)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAI4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39627.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_971_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6769..7314)
DNA (546bp) protein (182aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDI5_9BRAD rbh
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EKS39626.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
CDP-alcohol phosphatidyltransferase
scnpilot_expt_750_bf_scaffold_971_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7482..8555
DNA (1074bp) protein (358aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1) rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJB3_9BRAD rbh
scnpilot_expt_750_bf_scaffold_971_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8557..9213
DNA (657bp) protein (219aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFU3_9BRAD rbh
purN; phosphoribosylglycinamide formyltransferase PurN
scnpilot_expt_750_bf_scaffold_971_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9206..10540)
DNA (1335bp) protein (445aa)
sorbosone dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002EF1F31 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39623.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
L-sorbosone dehydrogenase
scnpilot_expt_750_bf_scaffold_971_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10692..10895)
DNA (204bp) protein (68aa)
Cold shock protein CspE n=2 Tax=Bradyrhizobiaceae RepID=F7QM40_9BRAD
Cold shock protein CspE {ECO:0000313|EMBL:EGP08043.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
cold-shock DNA-binding domain-containing protein
scnpilot_expt_750_bf_scaffold_971_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11245..12318
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PPC2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40193.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
conserved exported hypothetical protein
scnpilot_expt_750_bf_scaffold_971_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12427..13257)
DNA (831bp) protein (277aa)
YjbE family integral membrane protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJA8_9BRAD rbh
YjbE family integral membrane protein {ECO:0000313|EMBL:EKS39620.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broom
hypothetical protein
scnpilot_expt_750_bf_scaffold_971_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13312..13734)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=2 Tax=Bradyrhizobiaceae RepID=F7QM37_9BRAD
scnpilot_expt_750_bf_scaffold_971_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14032..14298
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PML7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39618.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
sulfur globule protein precursor
scnpilot_expt_750_bf_scaffold_971_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14488..14700
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDH7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39616.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_expt_750_bf_scaffold_971_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14818..16677
DNA (1860bp) protein (620aa)
glycosyl transferase family 1 n=1 Tax=Afipia birgiae RepID=UPI0002E56C0A rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39615.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter
scnpilot_expt_750_bf_scaffold_971_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16816..17262)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae PF51_9BRAD">RepID=K8PF51_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08035.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_971_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17655..18107)
DNA (453bp) protein (151aa)
DNA polymerase III chi subunit {ECO:0000313|EMBL:EGP08034.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EGP08034.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
DNA polymerase III subunit chi (EC:2.7.7.7)
DNA polymerase III chi subunit n=2 Tax=Bradyrhizobiaceae RepID=F7QM31_9BRAD
scnpilot_expt_750_bf_scaffold_971_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18219..19760)
DNA (1542bp) protein (514aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAG9_9BRAD rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=883078 speci
scnpilot_expt_750_bf_scaffold_971_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20154..21167
DNA (1014bp) protein (338aa)
Permease n=2 Tax=Bradyrhizobiaceae RepID=F7QM28_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40182.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
permease YjgP/YjgQ
Displaying 21 items

View Taxonomy