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scnpilot_expt_750_bf_scaffold_6253

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_6253_1
unknown

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comp(3..182)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR21395.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
scnpilot_expt_750_bf_scaffold_6253_2
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(310..708)
DNA (399bp) protein (133aa)
cytochrome C biogenesis protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034BD910
Cytochrome C biogenesis protein
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AIQ93449.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methyl
scnpilot_expt_750_bf_scaffold_6253_3
unknown

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comp(908..2635)
DNA (1728bp) protein (576aa)
heme lyase subunit CcmF n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003641C15
Heme lyase, CcmF subunit {ECO:0000313|EMBL:CPR22007.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
heme lyase subunit CcmF
scnpilot_expt_750_bf_scaffold_6253_4

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comp(2655..3137)
DNA (483bp) protein (161aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGT9_HYPSM
Marine sediment metagenome DNA, contig: S01H1_S05323 {ECO:0000313|EMBL:GAG03332.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ccmE; cytochrome c-type biogenesis protein CcmE
scnpilot_expt_750_bf_scaffold_6253_5
unknown

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comp(3166..4344)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035C8EE7 rbh
Cytochrome C biogenesis protein {ECO:0000313|EMBL:CPR22009.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrob
cytochrome C biogenesis protein
scnpilot_expt_750_bf_scaffold_6253_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4417..5529)
DNA (1113bp) protein (371aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hy
Histidine kinase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDT2_9RHIZ rbh
histidine kinase
scnpilot_expt_750_bf_scaffold_6253_7
unknown

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comp(5566..5817)
DNA (252bp) protein (84aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Fi
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7K8_HYPSM
integral membrane sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_6253_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5807..6478)
DNA (672bp) protein (224aa)
transcriptional regulator n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037CCD15 rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHB49032.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium
Displaying 8 items

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