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scnpilot_expt_750_bf_scaffold_6441

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_6441_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..393)
DNA (393bp) protein (131aa)
Alpha/beta hydrolase fold protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPN3_HYPDA
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADJ23767.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomic
scnpilot_expt_750_bf_scaffold_6441_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(560..1141)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000366B2A6
Crp/Fnr family transcription regulator
Crp/Fnr family transcription regulator {ECO:0000313|EMBL:AHB47188.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hy
scnpilot_expt_750_bf_scaffold_6441_3
unknown

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comp(1520..1918)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_6441_4
unknown

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1947..2537
DNA (591bp) protein (197aa)
Adenylate/guanylate cyclase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B6B1_9RHIZ
Guanylate cyclase {ECO:0000313|EMBL:CPR19053.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
adenylate/guanylate cyclase
scnpilot_expt_750_bf_scaffold_6441_5
unknown

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2644..2841
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_6441_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3004..3228)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037149C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57419.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
scnpilot_expt_750_bf_scaffold_6441_7
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3459..4577
DNA (1119bp) protein (373aa)
Secretion protein HlyD family protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J939_HYPSM rbh
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:CCB66158.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyph
scnpilot_expt_750_bf_scaffold_6441_trna_1
unknown

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4676..4759
DNA (84bp)
transferRNA
scnpilot_expt_750_bf_scaffold_6441_8
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4824..5057)
DNA (234bp) protein (78aa)
Endonuclease/exonuclease/phosphatase family {ECO:0000313|EMBL:EDY81632.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium D
Displaying 9 items

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