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scnpilot_expt_750_bf_scaffold_3276

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3276_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..954)
DNA (954bp) protein (318aa)
Putative UBA/THIF-type NAD/FAD binding fold protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JG02_HYPSM
UBA/THIF-type NAD/FAD binding fold protein
Putative UBA/THIF-type NAD/FAD binding fold protein {ECO:0000313|EMBL:CCB65518.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;
scnpilot_expt_750_bf_scaffold_3276_2
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(959..2110)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Methylobacterium extorquens RepID=C5B4D8_METEA rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ96068.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_3276_3
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2299..2907
DNA (609bp) protein (203aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3IUU7_RHOS4
DNA-directed RNA polymerase specialized sigma subunit, sigma24
Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence {ECO:0000313|EMBL:ABA81687.2}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodob
scnpilot_expt_750_bf_scaffold_3276_4
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3004..3234
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Rhodobacter sphaeroides RepID=U5NRT4_RHOS4
hypothetical protein
Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence {ECO:0000313|EMBL:AGY32510.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodob
scnpilot_expt_750_bf_scaffold_3276_5
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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3245..4003
DNA (759bp) protein (253aa)
Putative Zn peptidase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3IUU8_RHOS4
Uncharacterized protein {ECO:0000313|EMBL:GAM98936.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
putative Zn peptidase
scnpilot_expt_750_bf_scaffold_3276_6
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4283..5059)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4R916_9CAUL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESQ87938.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
scnpilot_expt_750_bf_scaffold_3276_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5683..5928)
DNA (246bp) protein (82aa)
Polyvinyl alcohol dehydrogenase (Cytochrome) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCL4_9BRAD
Polyvinyl alcohol dehydrogenase (Cytochrome) {ECO:0000313|EMBL:ERF82211.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sour
hypothetical protein
scnpilot_expt_750_bf_scaffold_3276_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6037..6678)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJM6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38593.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_3276_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6675..7007)
DNA (333bp) protein (111aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NN76_9BRAD
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS31772.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
SigD; RNA polymerase sigma factor
scnpilot_expt_750_bf_scaffold_3276_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7029..7574
DNA (546bp) protein (182aa)
radical SAM protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA105
Uncharacterized protein {ECO:0000313|EMBL:GAO40249.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hopanoid biosynthesis associated radical SAM protein HpnH
scnpilot_expt_750_bf_scaffold_3276_11
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7521..8111)
DNA (591bp) protein (197aa)
phosphorylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA102
Hopanoid-associated phosphorylase {ECO:0000313|EMBL:EHM03395.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae
hopanoid-associated phosphorylase
Displaying 11 items

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