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scnpilot_expt_750_bf_scaffold_3293

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3293_1
bacterium YEK0313, Bacteria

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comp(1..675)
DNA (675bp) protein (225aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAE8_STAND
scnpilot_expt_750_bf_scaffold_3293_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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848..1801
DNA (954bp) protein (318aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=670307 species="Bac
Aspartate carbamoyltransferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDX5_9RHIZ rbh
scnpilot_expt_750_bf_scaffold_3293_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1854..3191
DNA (1338bp) protein (446aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=670307 species="Bacteria; Proteobacteria; Alphap
Dihydroorotase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8U2_9RHIZ rbh
dihydroorotase
scnpilot_expt_750_bf_scaffold_3293_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3237..3887
DNA (651bp) protein (217aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Nitratireductor indicus C115 RepID=K2NX95_9RHIZ
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
putative glycerol-3-phosphate acyltransferase PlsY
scnpilot_expt_750_bf_scaffold_3293_5
unknown

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3874..5091
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000375F53B rbh
DNA processing protein DprA {ECO:0000313|EMBL:CPR15428.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium
DNA protecting protein DprA
scnpilot_expt_750_bf_scaffold_3293_6
unknown

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comp(4990..5202)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3293_7
unknown

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5544..8309
DNA (2766bp) protein (922aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CPR15424.1}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CPR15424.1};; DNA topoisomerase I {ECO:0000256|HAMAP-
DNA topoisomerase I subunit omega (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDX9_9RHIZ rbh
scnpilot_expt_750_bf_scaffold_3293_8
unknown

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8330..9778
DNA (1449bp) protein (483aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CPR15421.1}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CPR15421
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003634C5E
ribonuclease R
Displaying 8 items

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