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scnpilot_expt_750_bf_scaffold_3558

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3558_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..231)
DNA (231bp) protein (77aa)
acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037863A5
acyl-CoA dehydrogenase
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48937.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
scnpilot_expt_750_bf_scaffold_3558_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(303..1502)
DNA (1200bp) protein (400aa)
leucine-binding protein (LBP) n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035CF1DC rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3558_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1598..2587)
DNA (990bp) protein (330aa)
fatty-acid--CoA ligase (EC:6.2.1.3)
fatty-acid--CoA ligase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037DA2E8
Fatty-acid--CoA ligase {ECO:0000313|EMBL:ETR74749.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
scnpilot_expt_750_bf_scaffold_3558_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2557..3315)
DNA (759bp) protein (253aa)
fatty-acid--CoA ligase (EC:6.2.1.3)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4U8_9BRAD
Fatty-acid--CoA ligase {ECO:0000313|EMBL:ETR74749.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
scnpilot_expt_750_bf_scaffold_3558_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3434..4237
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2ABV1_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE57986.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
scnpilot_expt_750_bf_scaffold_3558_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4122..4880)
DNA (759bp) protein (253aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I3J2_9BRAD rbh
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_3558_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4877..6028)
DNA (1152bp) protein (384aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YD09_9BRAD rbh
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter permease
scnpilot_expt_750_bf_scaffold_3558_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6044..6919)
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI0002E57BF0 rbh
ABC transporter permease {ECO:0000313|EMBL:KJC47790.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
ABC transporter permease
scnpilot_expt_750_bf_scaffold_3558_9
unknown

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7138..7803
DNA (666bp) protein (222aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CPR20394.1}; EC=2.1.1.77 {ECO:0000313|EMBL:CPR20394.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDG1_9RHIZ
protein-L-isoaspartate O-methyltransferase
scnpilot_expt_750_bf_scaffold_3558_10
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7855..9504)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SH50_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49807.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
scnpilot_expt_750_bf_scaffold_3558_11
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9826..10125
DNA (300bp) protein (100aa)
Acetoacetyl-CoA synthetase {ECO:0000313|EMBL:EKF40897.1}; EC=6.2.1.16 {ECO:0000313|EMBL:EKF40897.1};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriac
Acetoacetyl-CoA synthetase n=1 Tax=Nitratireductor indicus C115 RepID=K2PIA8_9RHIZ
acetoacetyl-CoA synthase
Displaying 11 items

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