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scnpilot_expt_750_bf_scaffold_1121_25

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(18518..22033)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=883078 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 999.99
  • Bit_score: 2181
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBC6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 999.99
  • Bit_score: 2181
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 999.99
  • Bit_score: 1995
  • Evalue 0.0

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3516
ATGAAGACGTCGGCCAAATCTCCGGCGCAGGCGCTGCGGCCCGGCCACGCGCTGACCCTCGCCAATGTGGCCGAGGGCGCGGAAGGCCTTGTGATCTCGGACCTCGCGCGGGCGGTCGCGGCGAAGAAGGACGCGCCCGCGGTCAGCCTCGTCGTAGTATGCCGCGACGGGCCGCGCATGGCGCAGCTTGCGCGGGCGCTGGAGTTCTTTGCGCCCGATTTGGGCGTGCTGCAGTTTCCGGCATGGGACTGCCAGCCCTATGACCGCGTCTCGCCCCATGGCGGCATTCTGGCGCAACGCCTCACCACGCTGGCGAAGCTCTCGCGGCTCAAGGGCAGCGAGAAGGCGCTGATCGTGCTGACCACCGTGAACGCCATCGTCCAGCGCGTGCCCGCGCGCGAAGTGGTCGCGGCGCAAGCGCTGTCACTCGTCCCCAGCCACCGCGTGCCGATGGACAACATCGCGGCATGGCTGGAGCATAACGGCTACAACCGCACGTCGACCGTGCGCGAGCCGGGCGAATATGCCGTGCGCGGCGGCATCCTCGATCTGTTTCCGGCGGGGCTCGACCAGCCGGTGCGCCTCGACTTCTTCGGTGACACGCTGGAATCGATCCGCACCTTTGACGCCGAATCCCAGCGCACGCTGCTGGACATGCGCGGGCTCGATCTGGTCCCGGTGTCGGAATTCCAGCTTGTCACCGAAACCATCAAGCGCTTCCGCATGGGATACGTGGCGCAGTTCGGCGCGCCGGACCGCGACGACATGCTTTATGAAGCAGTGAGCGAAGGCCGCCGCCATCCCGGCATGGAGCACTGGCTACCGCTGTTCCAGGAGCGGATGGACACGCTGTTCGATTATCTCGACGGCTCGCCCGTGGTGCTGGAGCATCAGGCTGAGGATGCCGCGCGCGAGCGCTTCACCCAGATCGGCGACTATTACGAGGCGCGCCGCGAGGCGCTGGATACGCCCGGCGGCGGCGCGATCTACAAGCCGCTGCCGCCCGACCGGCTGTATCTCACCGACAGCGAATGGACGCAGCATCTGTCCGACGTCGCGCTGGCGCGGCTGACGCCATTCGCGCTGCCGGATGGCGAAGGCGTGATCGACATCGATGCGCGGCAGGGCCGCGACTTCGCGCCGGAACGCGGCGACGCCAAGGTCAACGTGTTCGAGAGCGTGGTGGCGCATATCAACGGCCTGCAGGCTGCGCGCCGGAAGGTCGTCGTCGCGCTGTGGAGCGAAGGCTCGCGCGACCGCATGGCCTCGATGCTGAAGGACCACAAGCTGCTCAACATCACCAGCGTGAATTCGTGGCGCGCGGTGCAGGCGACGCCGCGCAACGAAACCATGCTGGCGGTGATCGGCCTCGAGTCCGGTTTCGAGACCGAGAGCATCGCACTCATCACCGAGCAGGACATCCTTGGCGATCGGCTGGTGCGGCCGCGCAAGGCCAGCCGCAAGCTGGAGAACTTCATCTCTGAAGTGACGTCGCTGGCCACCGGCGACATCGTCGTTCATGTCGAGCACGGCATCGGCCGTTTCGTCGGGTTGCAGACGCTGCAGGTCGGCGGCGCGCCGCATGACTGTCTCGAACTGCACTATGCCAACGAGACAAAGCTGTTCCTGCCGGTCGAGAACATCGAGCTTCTGTCGCGCTACGGCTCCGACCAGACCCATGTCGAACTCGACAGGTTAGGGGGCGGCGGATGGCAGGCGCGCAAGGCCAAGCTCAAGAACCGCATCCGCGAGATCGCGGGCGAACTGATCAAGATCGCCGCCGAGCGCCACGTCCACGAGGCGCCGAAATTCCCGATCCATCAGGGCACCTACGACGAATTCTGCGCGCGTTTCCCCTATGACGAGACCGAGGACCAGCTCGGCGCGATCAACGCCGCGTTGCATGACCTCGATCTGGGACGCCCGATGGATCGGCTGGTCTGCGGCGATGTCGGTTTCGGCAAGACGGAAGTGGCGCTGCGCGCGGCGTTCGCGGTCGCGCTGGATGGCAAGCAGGTGGCGGTCGTGGTGCCGACCACGCTCTTGGCGCGTCAGCATACGAAGACCTTCACCGAACGCTTCAAGGGCTTCCCGGTGAATGTGGCGCAGGCCTCGCGTCTGGTCGCGCCCAAGCAGATGACGCTGGTAAAGAAGGATCTTGCGGAGGGCAAGATCGACATCATCGTCGGCACCCATGCGCTGCTCGGCAAGAGCATCAAGTTCAAGGACCTCGGGCTTCTGATCGTGGACGAGGAACAGCACTTCGGCGTCTCGCACAAGGAACGGCTGAAGCAGCTTCGCGCCGAAATCCATGTGCTGACGCTCTCGGCAACGCCGATCCCGCGCACATTGCAACTGGCGCTGACGGGCGTGCGCGAACTCTCGATCATCGCGTCGCCGCCGGTCGATCGTCTGGCGGTGCGCACCTTCGTCGCGCCGCACGATCCGCTGATGATCCGCGAGGCGCTGCTGCGCGAGCGCTATCGTGGCGGACAGGCGTTCTATGTCGTGCCGCGCATCGAATATCTCGCCGAGGTGAAGGATTTTCTCGACAAGCATGTGCCGGAGATGAAGGTCGCGGTCGCGCACGGCCAGATGCCGCCGACCGTGATCGAGGACATCATGTCCGCGTTCTATGACGGCAAGTACGACGTGCTGCTGTCGACCACCATCGTGGAATCCGGTCTCGACATTCCGTCCGCGAACACGCTGATCGTGCATCGCGCCGACATGTTCGGTCTCGCGCAGCTTTATCAGTTGCGCGGGCGCGTCGGCCGCTCGAAGCTGCGCGCCTATGCGCTGTTCACCCTGCCGTCCACGCACAAGATCACCGCGCAGGCGGAGCGCCGCCTGAAGGTGCTACAGTCGCTGGACAACCTCGGTGCGGGCTTCCAACTCGCATCGCACGATCTCGACATCCGCGGCGCGGGCAATCTGCTCGGCGAGGAACAGTCCGGCCATATCAAGGAAGTCGGTTTCGAGCTGTACCAACAGATGCTTGAGGAGGCGATCGTCTCGCTCAAGGCTGGTATCTCCGAGCCTGTCGCGGACCGCTGGTCGCCGCAGATCACCCTCGGCATGCCGGTGCTGATTCCGGAGGATTATGTCGCGGACCTTGCGATCCGGCTGTCGCTCTATCGGCGTCTGGCCGATCTCGACACCGACGAGGAGATCGAGAACTTCGGAGCGGAGTTGCGCGACCGTTTCGGCCCGCTGCCGGACGAGGTGCGCTGGCTGTTCAAGGTCGCGGCCGTCAAGGCCTATTGCCGCCGCGCCAATGTCGAGAAGGTCGATGCCGGGCCGAAGGGCGCGGTCATCAGCTTCCGCGACAACGCCTTCGCCCAGCCCGAGAAGCTGGTGCATTTCATCCGCCAGCACGGACAGGCTGCGAAGGTGCGCCCCGACATGAAGGTGGTGTTCTTCCAGGAATGGGAAACCGCGGAGGAACGTGTTGAAGGCGCGACCACGATCCTGCGCGATCTGGCCAATCTCGCCGAAGGCAAGAAGGCGGCGTAG
PROTEIN sequence
Length: 1172
MKTSAKSPAQALRPGHALTLANVAEGAEGLVISDLARAVAAKKDAPAVSLVVVCRDGPRMAQLARALEFFAPDLGVLQFPAWDCQPYDRVSPHGGILAQRLTTLAKLSRLKGSEKALIVLTTVNAIVQRVPAREVVAAQALSLVPSHRVPMDNIAAWLEHNGYNRTSTVREPGEYAVRGGILDLFPAGLDQPVRLDFFGDTLESIRTFDAESQRTLLDMRGLDLVPVSEFQLVTETIKRFRMGYVAQFGAPDRDDMLYEAVSEGRRHPGMEHWLPLFQERMDTLFDYLDGSPVVLEHQAEDAARERFTQIGDYYEARREALDTPGGGAIYKPLPPDRLYLTDSEWTQHLSDVALARLTPFALPDGEGVIDIDARQGRDFAPERGDAKVNVFESVVAHINGLQAARRKVVVALWSEGSRDRMASMLKDHKLLNITSVNSWRAVQATPRNETMLAVIGLESGFETESIALITEQDILGDRLVRPRKASRKLENFISEVTSLATGDIVVHVEHGIGRFVGLQTLQVGGAPHDCLELHYANETKLFLPVENIELLSRYGSDQTHVELDRLGGGGWQARKAKLKNRIREIAGELIKIAAERHVHEAPKFPIHQGTYDEFCARFPYDETEDQLGAINAALHDLDLGRPMDRLVCGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHTKTFTERFKGFPVNVAQASRLVAPKQMTLVKKDLAEGKIDIIVGTHALLGKSIKFKDLGLLIVDEEQHFGVSHKERLKQLRAEIHVLTLSATPIPRTLQLALTGVRELSIIASPPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVVPRIEYLAEVKDFLDKHVPEMKVAVAHGQMPPTVIEDIMSAFYDGKYDVLLSTTIVESGLDIPSANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPSTHKITAQAERRLKVLQSLDNLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAIVSLKAGISEPVADRWSPQITLGMPVLIPEDYVADLAIRLSLYRRLADLDTDEEIENFGAELRDRFGPLPDEVRWLFKVAAVKAYCRRANVEKVDAGPKGAVISFRDNAFAQPEKLVHFIRQHGQAAKVRPDMKVVFFQEWETAEERVEGATTILRDLANLAEGKKAA*