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scnpilot_expt_750_bf_scaffold_1121

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1121_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..378)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PQ27_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40458.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

554..1291
DNA (738bp) protein (246aa)
allophanate hydrolase n=1 Tax=Afipia birgiae RepID=UPI000376CD11 rbh
TIGR00370 family protein {ECO:0000313|EMBL:EKS40457.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_3
unknown

Not on your lists

comp(1555..1764)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1121_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1952..2254
DNA (303bp) protein (101aa)
Allophanate hydrolase 2 subunit 2 {ECO:0000313|EMBL:EGP07472.1}; EC=3.5.1.54 {ECO:0000313|EMBL:EGP07472.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
Allophanate hydrolase 2 subunit 2 n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMW9_9BRAD
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2273..2701
DNA (429bp) protein (143aa)
UPF0271 protein HMPREF9695_01871 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P925_9BRAD
UPF0271 protein HMPREF9695_01871 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broome
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2679..2954
DNA (276bp) protein (92aa)
UPF0271 protein CSIRO_2923 n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMW8_9BRAD
UPF0271 protein lamB {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C
LamB/YcsF family protein
scnpilot_expt_750_bf_scaffold_1121_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2955..3110)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F97D3A
Uncharacterized protein {ECO:0000313|EMBL:EKS38033.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_expt_750_bf_scaffold_1121_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3385..4710
DNA (1326bp) protein (442aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PI20_9BRAD rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4849..5823)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI49_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38043.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
alcohol dehydrogenase zinc-binding domain-containing protein
scnpilot_expt_750_bf_scaffold_1121_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5915..6649)
DNA (735bp) protein (245aa)
Integral membrane protein TerC n=2 Tax=Bradyrhizobiaceae RepID=F7QMV5_9BRAD rbh
Integral membrane protein TerC {ECO:0000313|EMBL:EGP07458.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium
integral membrane protein TerC
scnpilot_expt_750_bf_scaffold_1121_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6646..6987)
DNA (342bp) protein (114aa)
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851
Phosphatidylcholine synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PFW6_9BRAD
phosphatidylcholine synthase
scnpilot_expt_750_bf_scaffold_1121_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7017..7280)
DNA (264bp) protein (88aa)
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851
phosphatidylcholine synthase (EC:2.7.8.24)
phosphatidylcholine synthase n=1 Tax=Afipia birgiae RepID=UPI0002DB87EC
scnpilot_expt_750_bf_scaffold_1121_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7405..8598
DNA (1194bp) protein (398aa)
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P940_9BRAD rbh
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase {ECO:0000313|EMBL:EKS38046.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipi
2-octaprenyl-6-methoxyphenyl hydroxylase
scnpilot_expt_750_bf_scaffold_1121_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8746..9423)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI54_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38048.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
nitroreductase
scnpilot_expt_750_bf_scaffold_1121_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9544..9843)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBB3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38049.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9959..10132
DNA (174bp) protein (58aa)
UPF0391 membrane protein HMPREF9695_01890 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEP5_9BRAD
UPF0391 membrane protein HMPREF9695_01890 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10135..11091)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P946_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38051.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
auxin efflux carrier
scnpilot_expt_750_bf_scaffold_1121_18
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11217..11549
DNA (333bp) protein (111aa)
DNA-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037327D8
Hemimethylated DNA binding domain-containing protein {ECO:0000313|EMBL:ERF80058.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11655..11855)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI57_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38053.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12004..12768)
DNA (765bp) protein (255aa)
invasion associated locus B n=1 Tax=Afipia birgiae RepID=UPI0003756A1F rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38054.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
invasion associated locus B
scnpilot_expt_750_bf_scaffold_1121_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12867..14927
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PQ05_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40433.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_22
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14941..16452
DNA (1512bp) protein (504aa)
AMP-dependent synthetase and ligase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMU4_9BRAD rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EGP07447.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bact
acid-CoA ligase
scnpilot_expt_750_bf_scaffold_1121_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16538..17719
DNA (1182bp) protein (394aa)
signal peptide protein n=1 Tax=Afipia birgiae RepID=UPI0003162DB5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38057.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17935..18324
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI62_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38058.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
PRC-barrel protein
scnpilot_expt_750_bf_scaffold_1121_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18518..22033)
DNA (3516bp) protein (1172aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=883078 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBC6_9BRAD rbh
transcription-repair coupling factor
scnpilot_expt_750_bf_scaffold_1121_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22030..22227)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEQ7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38060.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22466..24580
DNA (2115bp) protein (705aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EGP07443.1}; EC=3.6.1.- {ECO:0000313|EMBL:EGP07443.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
ATP-dependent DNA helicase RecG n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMU0_9BRAD rbh
recG; ATP-dependent DNA helicase
scnpilot_expt_750_bf_scaffold_1121_28
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24592..25404)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PFV4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40426.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
type 11 methyltransferase
scnpilot_expt_750_bf_scaffold_1121_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25504..26277)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P643_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38062.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1121_30
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26401..28227)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMT6_9BRAD rbh
Displaying items 1-30 of 51 in total

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