ggKbase home page

scnpilot_expt_750_bf_scaffold_1250_20

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: 22321..23187

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6I9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 289.0
  • Bit_score: 510
  • Evalue 8.40e-142
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFI51936.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipi similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 289.0
  • Bit_score: 510
  • Evalue 1.20e-141
acrE; acriflavine resistance protein E similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 287.0
  • Bit_score: 454
  • Evalue 2.00e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGGCGCAGGAGGCTGCACAGGCCAAGGCGCAGGCCGTGCTGGATCAGGCAAACAAGCAGGCACATCGCATCGCGACACTGGCCTCGCAGCATGTCACCTCCGAAGCGGAGAATGAAAAGGCCATCGCCGCGAAGCGCCAGGCGGAAGCGGACCTTGCCGCGCGAAAGGCTGAAGTCGCGCGCGCGAAACTCAATCTGGATTACGCAACGATCCGCGCGCCGATCAAGGGCAGGATCGGTGCCGCACTGGTGAGCGAGGGCGCGCTTGTCACCGCGAACGATACCACCAATCTCGCAACCATCCGCCAGTTGGATCCGATTTACGCGGATTTCACTCAGTCGGCTGCAGATTTGATCAGGCTGCGCGACGCGCTCGATCGCGGCGATCTGGAAGAAGTGAGCAAGGGCGCAGCCAAGGTCAGGCTGATCATCGACGGCCGGAAATATCCACTCGATGGCAGGCTGCTGTTTTCCGAGGCCAAGGTGGATGCCAGCACCGGGCAGGTCACGCTGCGCGGCGAATTCCCAAACCCGAATGGTGAGCTTCTGCCGGGAATGTATGTGCGTGTCATGATCGAACAGGGTGTCGATACGGACGCGATCGCAATCCCCGAGCAGGCCGTTCAGCGCGGTAACAGCGGCAGCAGCGAAGTCTATGTCGTGAAACCTGACGGGCGTATCGCGAAGCAGGCCATCCGCACCGGCGATCTTCAGGACGGCAAATGGCTGGTGAGCGAAGGCCTGAAGGCAGGCGACCATGTCGTGGTCGAAGGTTTTCAGAAGTTCGTCGCGGGCGATCTTGTTTCACCGATTTCGACCGATGCGAAGTTGAGCGCGGACGCGGCTGCGAAGCCCGCAGTGAACTAA
PROTEIN sequence
Length: 289
MAQEAAQAKAQAVLDQANKQAHRIATLASQHVTSEAENEKAIAAKRQAEADLAARKAEVARAKLNLDYATIRAPIKGRIGAALVSEGALVTANDTTNLATIRQLDPIYADFTQSAADLIRLRDALDRGDLEEVSKGAAKVRLIIDGRKYPLDGRLLFSEAKVDASTGQVTLRGEFPNPNGELLPGMYVRVMIEQGVDTDAIAIPEQAVQRGNSGSSEVYVVKPDGRIAKQAIRTGDLQDGKWLVSEGLKAGDHVVVEGFQKFVAGDLVSPISTDAKLSADAAAKPAVN*