ggKbase home page

scnpilot_expt_750_bf_scaffold_2013_9

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(8346..8612)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034678BE similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 80.0
  • Bit_score: 111
  • Evalue 3.50e-22
ABC transporter {ECO:0000313|EMBL:KIZ47881.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 80.0
  • Bit_score: 104
  • Evalue 5.90e-20
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 82.0
  • Bit_score: 66
  • Evalue 6.10e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGCACTGTCCGNNNNNNNNNNNNTCTGCACTCGATGAAATGACGGCTCGCAAGCTGCGTGCCGAATTCGTCAAGCTGGTGAAGGAGAACGGCAAGACCGCTGTCTTCATTACGCACTCCATTAACGAGGCATTGGAAATCGGCGACCGGATCGTGGTTCTGAAGCGCCCGGCGAATATCGCGATCGACGTTCTGCTCACGCCGGAAGCCAAGGCGGAGAAGCAGGAAGTCATTCGCGGGCAAATACAGAGCGTATTGGCTGCATAA
PROTEIN sequence
Length: 89
MHCPXXXXSALDEMTARKLRAEFVKLVKENGKTAVFITHSINEALEIGDRIVVLKRPANIAIDVLLTPEAKAEKQEVIRGQIQSVLAA*