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scnpilot_expt_750_bf_scaffold_2013

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2013_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..800)
DNA (798bp) protein (266aa)
Protein FdhD homolog n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWP1_9BRAD rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so
formate dehydrogenase accessory protein
scnpilot_expt_750_bf_scaffold_2013_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1028..3622)
DNA (2595bp) protein (865aa)
NAD-dependent formate dehydrogenase alpha subunit n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJW4_9BRAD rbh
NAD-dependent formate dehydrogenase alpha subunit {ECO:0000313|EMBL:EGP08579.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhi
formate dehydrogenase alpha subunit
scnpilot_expt_750_bf_scaffold_2013_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3634..4011)
DNA (378bp) protein (126aa)
NAD-dependent formate dehydrogenase beta subunit n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJW3_9BRAD
NAD-dependent formate dehydrogenase beta subunit {ECO:0000313|EMBL:EGP08578.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhiz
formate dehydrogenase beta subunit
scnpilot_expt_750_bf_scaffold_2013_4
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

4562..5557
DNA (996bp) protein (332aa)
hypothetical protein CfetvA_00317, partial id=1326637 bin=GWE1_T_denit_62_9 species=Campylobacter fetus genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein CfetvA_00317, partial Tax=RBG_13_Chloroflexi_66_10_curated
scnpilot_expt_750_bf_scaffold_2013_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5446..5922)
DNA (477bp) protein (159aa)
NAD-dependent formate dehydrogenase gamma subunit n=2 Tax=Bradyrhizobiaceae RepID=F7QJW2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31832.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
ATP synthase subunit E
scnpilot_expt_750_bf_scaffold_2013_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6139..7032)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRV1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31831.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2013_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7407..7790)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G297_HERAR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2013_8
bacterium YEK0313, Bacteria

Not on your lists

comp(7766..8320)
DNA (555bp) protein (185aa)
Uncharacterized protein UPF0065 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7S0_ANADF
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ09996.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_2013_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8346..8612)
DNA (267bp) protein (89aa)
ABC transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034678BE
ABC transporter {ECO:0000313|EMBL:KIZ47881.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_2013_10
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8575..9045)
DNA (471bp) protein (157aa)
ABC transporter {ECO:0000313|EMBL:ESR26862.1}; EC=3.6.3.25 {ECO:0000313|EMBL:ESR26862.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;
ABC transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034678BE
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_2013_11
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9042..9851)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034573B0 rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ESR26861.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Luti
binding-protein-dependent transport systems inner membrane component
scnpilot_expt_750_bf_scaffold_2013_12
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9848..10819)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034748EF rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR26860.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense A
ABC transporter
scnpilot_expt_750_bf_scaffold_2013_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10835..11659)
DNA (825bp) protein (275aa)
3-oxoadipate enol-lactonase (EC:3.1.1.24)
3-oxoadipate enol-lactonase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034834AA rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ47880.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
scnpilot_expt_750_bf_scaffold_2013_14
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11669..12124)
DNA (456bp) protein (152aa)
carbon monoxide dehydrogenase subunit G n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034CA9B7
Uncharacterized protein {ECO:0000313|EMBL:ESR26851.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense A
hypothetical protein
scnpilot_expt_750_bf_scaffold_2013_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12135..13112)
DNA (978bp) protein (326aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C4F10 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ47855.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
amidohydrolase 2
scnpilot_expt_750_bf_scaffold_2013_16
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13117..15516)
DNA (2400bp) protein (800aa)
hypothetical protein, partial n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B58F7D rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR26849.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense A
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
scnpilot_expt_750_bf_scaffold_2013_17
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15513..15950)
DNA (438bp) protein (146aa)
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:ESR26848.1}; EC=1.2.99.2 {ECO:0000313|EMBL:ESR26848.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; R
(2Fe-2S)-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000344AA10
carbon monoxide dehydrogenase
Displaying 17 items

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