ggKbase home page

scnpilot_expt_750_bf_scaffold_2115_12

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(9882..10544)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMG3_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 5.20e-35
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 1.50e-35
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS69206.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xantho similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 7.30e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGAGTGAGATAACTATGAAGCCGCGCTCGACGACGCGCCTGGCGAGCAGCATTGCCATCATCGTCATTCTCGCGGCTGGCGGGCTCGCCGCATACTATCTCGTCACGACGAAGCCTGCGGCGAACACCTCGGCCCACGGCCACGGCGACAAGGGTGGCGATGGGCACGATGACGGCCACGGACACAGCGAGAAGCTGGTCGTCAAGCTCACGCCGGCTCAACTCAAGAGCGCTGATCTGACCATCGAGACCGCCGGCGAAGGTGTCATCCGCGAAGTCCTGCCGCTCGACGGAATCATCCTACCGAACGAGGAGAGGGTCGCCGCCGTACTGCCGCGCTTCGGCGGCGTACTGCGGGCCGCCTCGAAGCGCATCGGCGACAAGGTCACGCAAGGCGAGGTCGTGGCGCGCATCGAGAGTAACGAAAGCCTTACGCAGTACGACGTCGTGGCGCCGATCAGTGGGACAGTGATCGAGCGCCGCGGCGTGCTTGGTGAGTATGCCGACAAGGACCGCCGACTGATGGTGATCGCTGATCTCTCGACACTGTGGGTCGACTTCCGCGTCTACCAGCAGCTGCTCGTGCTCACGGCCGCGCTGATCGCGCTGGCGCTGCAACGCGCCTGGGTCGGCAAGGCGATGGCGCCCGCCGGCGACGACTGA
PROTEIN sequence
Length: 221
MSEITMKPRSTTRLASSIAIIVILAAGGLAAYYLVTTKPAANTSAHGHGDKGGDGHDDGHGHSEKLVVKLTPAQLKSADLTIETAGEGVIREVLPLDGIILPNEERVAAVLPRFGGVLRAASKRIGDKVTQGEVVARIESNESLTQYDVVAPISGTVIERRGVLGEYADKDRRLMVIADLSTLWVDFRVYQQLLVLTAALIALALQRAWVGKAMAPAGDD*