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scnpilot_expt_750_bf_scaffold_2115

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2115_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..118
DNA (117bp) protein (39aa)
Arsenite oxidase large subunit {ECO:0000313|EMBL:CCV04584.1}; EC=1.20.9.1 {ECO:0000313|EMBL:CCV04584.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacte
arsenite oxidase large subunit (EC:1.20.98.1)
Arsenite oxidase large subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIS8_9RHIZ
scnpilot_expt_750_bf_scaffold_2115_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(853..1254)
DNA (402bp) protein (134aa)
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH47_NITHX
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABE64450.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
scnpilot_expt_750_bf_scaffold_2115_3
unknown

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1363..2610
DNA (1248bp) protein (416aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2115_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2963..3364
DNA (402bp) protein (134aa)
cadA3; cadmium-translocating P-type ATPase (EC:3.6.3.3)
Cadmium-translocating P-type ATPase n=2 Tax=Oligotropha carboxidovorans RepID=B6J9V0_OLICO
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase {ECO:0000313|EMBL:AEI05211.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha
scnpilot_expt_750_bf_scaffold_2115_5
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3440..3895
DNA (456bp) protein (152aa)
Disulfide bond formation protein n=6 Tax=Pseudomonas RepID=I4CZN4_PSEST
disulfide bond formation protein
Disulfide bond formation protein {ECO:0000313|EMBL:BAP77512.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
scnpilot_expt_750_bf_scaffold_2115_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3892..4557
DNA (666bp) protein (222aa)
DSBA oxidoreductase n=1 Tax=Nitratireductor indicus C115 RepID=K2NQW7_9RHIZ
DSBA oxidoreductase {ECO:0000313|EMBL:EKF40239.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor ind
DSBA oxidoreductase
scnpilot_expt_750_bf_scaffold_2115_7
unknown

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4947..5078
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2115_8
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5153..5737)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G7J4_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL76731.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_expt_750_bf_scaffold_2115_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5967..6389)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SA49_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB47292.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
scnpilot_expt_750_bf_scaffold_2115_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6367..9600)
DNA (3234bp) protein (1078aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMG5_XANP2
CzcA family heavy metal efflux protein
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABS69208.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.
scnpilot_expt_750_bf_scaffold_2115_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9608..9859)
DNA (252bp) protein (84aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Rhodopseudomonas palustris RepID=B3QDV9_RHOPT
RND divalent metal cation efflux membrane fusion protein CzcB
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACF00817.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodo
scnpilot_expt_750_bf_scaffold_2115_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9882..10544)
DNA (663bp) protein (221aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMG3_XANP2
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS69206.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xantho
scnpilot_expt_750_bf_scaffold_2115_13
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10545..11768)
DNA (1224bp) protein (408aa)
Putative outer membrane protein CzcC n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SA84_9BRAD
Putative outer membrane protein CzcC {ECO:0000313|EMBL:CCD91111.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
putative outer membrane protein precursor CzcC
scnpilot_expt_750_bf_scaffold_2115_14
unknown

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comp(11831..12193)
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2115_15
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12951..13490
DNA (540bp) protein (180aa)
FAD-dependent oxidoreductase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036F8A5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ68633.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
scnpilot_expt_750_bf_scaffold_2115_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13520..13735
DNA (216bp) protein (72aa)
Permease of the major facilitator superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP39_9PROT
major facilitator superfamily permease Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
the major facilitator superfamily permease
Displaying 16 items

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