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scnpilot_expt_750_bf_scaffold_3940_8

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(5798..6073)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVN2_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 88.0
  • Bit_score: 118
  • Evalue 3.80e-24
formamidopyrimidine-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 88.0
  • Bit_score: 118
  • Evalue 1.10e-24
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1. similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 88.0
  • Bit_score: 118
  • Evalue 5.30e-24

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGGCCAATACGAGCTCGGCACAGAAGGCAGCCCGCCAGGCGGCGCGGCGGACGGCAACGAACAAGGCCCGGCGCTCGCGCCTGCGGTCGACCGTGCGCAGCGTCGAGGTCGCGATTGCGGCAGGCGACAAGGCCGCCGCCGAGCAGGCGCTGAAGGCCGCCGAGCCGGTCATGATGCGCTCGGCCCAGAAGGGCGTCGTCCACAAGAAGACGATGTCGCGCAAGGTTTCGCGCCTCGCTGCGCGCATCAAATCGATCGGCGCAGCGGCCGGCTGA
PROTEIN sequence
Length: 92
MANTSSAQKAARQAARRTATNKARRSRLRSTVRSVEVAIAAGDKAAAEQALKAAEPVMMRSAQKGVVHKKTMSRKVSRLAARIKSIGAAAG*