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scnpilot_expt_750_bf_scaffold_3940

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3940_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..912
DNA (912bp) protein (304aa)
elongation factor G n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003702C6F
fusA; elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiace
scnpilot_expt_750_bf_scaffold_3940_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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991..2199
DNA (1209bp) protein (403aa)
Elongation factor Tu n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JV13_HYPDA rbh
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacter
scnpilot_expt_750_bf_scaffold_3940_3
unknown

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2272..2580
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037FBE10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000313|EMBL:CPR15616.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicr
rpsJ; 30S ribosomal protein S10
scnpilot_expt_750_bf_scaffold_3940_4
unknown

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2673..3383
DNA (711bp) protein (237aa)
50S ribosomal protein L3 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J585_HYPSM rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomic
rplC; 50S ribosomal protein L3
scnpilot_expt_750_bf_scaffold_3940_5
unknown

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3383..4003
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J584_HYPSM rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328, ECO:0000313|EMBL:CPR15621.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicro
rplD; 50S ribosomal protein L4
scnpilot_expt_750_bf_scaffold_3940_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4000..4293
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000369DB30
50S ribosomal protein L25
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum
scnpilot_expt_750_bf_scaffold_3940_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4310..5047
DNA (738bp) protein (246aa)
50S ribosomal protein L2 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JV18_HYPDA
50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobiu
scnpilot_expt_750_bf_scaffold_3940_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5798..6073)
DNA (276bp) protein (92aa)
30S ribosomal protein S20 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVN2_POLGS
formamidopyrimidine-DNA glycosylase
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.
Displaying 8 items

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