ggKbase home page

scnpilot_expt_750_bf_scaffold_6910

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_6910_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..922)
DNA (921bp) protein (307aa)
Peptidase S41 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9W1_9SPHN rbh
Peptidase S41 {ECO:0000313|EMBL:ENY80206.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
peptidase S41
scnpilot_expt_750_bf_scaffold_6910_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(927..1520)
DNA (594bp) protein (198aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYA1_9SPHN rbh
ribosomal RNA methyltransferase RrmJ/FtsJ
scnpilot_expt_750_bf_scaffold_6910_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1552..2568)
DNA (1017bp) protein (339aa)
Ppx/GppA phosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W974_9SPHN rbh
Ppx/GppA phosphatase {ECO:0000313|EMBL:ENY80208.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
Ppx/GppA phosphatase
scnpilot_expt_750_bf_scaffold_6910_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2744..3145)
DNA (402bp) protein (134aa)
17 kDa surface antigen n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPG4_9SPHN
17 kDa surface antigen {ECO:0000313|EMBL:ENY80209.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp
17 kDa surface antigen
scnpilot_expt_750_bf_scaffold_6910_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3320..4264
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UP64_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80210.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
scnpilot_expt_750_bf_scaffold_6910_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4304..4597)
DNA (294bp) protein (98aa)
50S ribosomal protein L28 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9W6_9SPHN
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
rpmB; 50S ribosomal protein L28
scnpilot_expt_750_bf_scaffold_6910_7
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4706..5101)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2I6P4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL51575.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
pseudouridine synthase
scnpilot_expt_750_bf_scaffold_6910_8
unknown

Not on your lists

5524..5961
DNA (438bp) protein (146aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_6910_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5987..6712
DNA (726bp) protein (242aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPG9_9SPHN rbh
dihydrodipicolinate reductase
scnpilot_expt_750_bf_scaffold_6910_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6792..7952
DNA (1161bp) protein (387aa)
Peptidase M48 Ste24p n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UP68_9SPHN rbh
Peptidase M48 Ste24p {ECO:0000313|EMBL:ENY80215.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
peptidase M48 Ste24p
scnpilot_expt_750_bf_scaffold_6910_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7949..8344
DNA (396bp) protein (132aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
nth; Endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9W9_9SPHN
Displaying 11 items

View Taxonomy