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scnpilot_expt_750_bf_scaffold_3360_11

Organism: SCNPILOT_EXPT_750_BF_Sphingopyxis_65_5_fragment

partial RP 4 / 55 BSCG 6 / 51 ASCG 1 / 38
Location: 9852..10331

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF71_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 159.0
  • Bit_score: 318
  • Evalue 4.40e-84
  • rbh
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 159.0
  • Bit_score: 318
  • Evalue 6.20e-84
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 159.0
  • Bit_score: 298
  • Evalue 1.00e-78

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAGGCGCTGACCAAGACGACCCAGTCGGCGAATGCCGGTACGGTCGAAAAGAAATGGGTGCTGATCGACGCCGACGGCCTGGTTGTTGGCCGCGTCGCGTCGATCATCGCCAATATCCTGCGCGGCAAGCACAAGCCGAGCTTTACCCCCCACGTCGATTGCGGTGACAATGTCATCGTCATCAACGCCGAAAAGGTGAAGTTCACCGGCAAGAAGCTGGCCGACAAGGTCTATTACAAGCACACCGGCTATGCCGGCGGCATCAAGGAAGTCACCGCCCAGAAGGTTTTGGAAGGCCGCTTCCCCGAGCGCGTGCTCGAAAAGGCCATCGAACGCATGATCCCGCGCGGCCCGCTCGGCCGCCAGCAGATGCGCAACCTGCGCATTTTCGCCGGCAGCGAACATCCGCACGAAGGGCAGAGCCCCGAAGTGATCGACGTCGCGTCGATGAACCGCAAGAACAAGGTGGGTGCATAA
PROTEIN sequence
Length: 160
MKALTKTTQSANAGTVEKKWVLIDADGLVVGRVASIIANILRGKHKPSFTPHVDCGDNVIVINAEKVKFTGKKLADKVYYKHTGYAGGIKEVTAQKVLEGRFPERVLEKAIERMIPRGPLGRQQMRNLRIFAGSEHPHEGQSPEVIDVASMNRKNKVGA*