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scnpilot_expt_750_bf_scaffold_3360

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3360_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..219
DNA (219bp) protein (73aa)
MerR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEE3_9SPHN
MerR family transcriptional regulator {ECO:0000313|EMBL:ENY82098.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
MerR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_3360_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280..585)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3J2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82097.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
scnpilot_expt_750_bf_scaffold_3360_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

759..2042
DNA (1284bp) protein (428aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF82_9SPHN rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ENY82096.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;"
methyl-accepting chemotaxis sensory transducer
scnpilot_expt_750_bf_scaffold_3360_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2152..2877
DNA (726bp) protein (242aa)
Aquaporin Z n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUE7_9SPHN rbh
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;
MIP family channel protein
scnpilot_expt_750_bf_scaffold_3360_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2980..3843)
DNA (864bp) protein (288aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1174684
exoN1; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUX4_9SPHN rbh
scnpilot_expt_750_bf_scaffold_3360_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3899..4408)
DNA (510bp) protein (170aa)
OmpA/MotB protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WED8_9SPHN rbh
OmpA/MotB protein {ECO:0000313|EMBL:ENY82093.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1
OmpA/MotB protein
scnpilot_expt_750_bf_scaffold_3360_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4429..6099)
DNA (1671bp) protein (557aa)
Diguanylate cyclase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3I6_9SPHN rbh
Diguanylate cyclase {ECO:0000313|EMBL:ENY82092.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. M
diguanylate cyclase
scnpilot_expt_750_bf_scaffold_3360_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6240..6773)
DNA (534bp) protein (178aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUE1_9SPHN rbh
peptide methionine sulfoxide reductase
scnpilot_expt_750_bf_scaffold_3360_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6842..7813)
DNA (972bp) protein (324aa)
Peptidase M48, Ste24p n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUW8_9SPHN rbh
Peptidase M48, Ste24p {ECO:0000313|EMBL:ENY82089.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
peptidase M48, Ste24p
scnpilot_expt_750_bf_scaffold_3360_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8894..9673
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3H9_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENY82087.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
scnpilot_expt_750_bf_scaffold_3360_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9852..10331
DNA (480bp) protein (160aa)
50S ribosomal protein L13 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF71_9SPHN rbh
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
rplM; 50S ribosomal protein L13
scnpilot_expt_750_bf_scaffold_3360_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10331..10720
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUD1_9SPHN
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
rpsI; 30S ribosomal protein S9
scnpilot_expt_750_bf_scaffold_3360_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10928..13015
DNA (2088bp) protein (696aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUW0_9SPHN rbh
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:ENY82084.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
hypothetical protein
scnpilot_expt_750_bf_scaffold_3360_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13016..14413
DNA (1398bp) protein (466aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUW0_9SPHN
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:ENY82084.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
hypothetical protein
scnpilot_expt_750_bf_scaffold_3360_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14551..15111
DNA (561bp) protein (187aa)
Peptidase C56, PfpI n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEC8_9SPHN rbh
Peptidase C56, PfpI {ECO:0000313|EMBL:ENY82083.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. M
peptidase C56, PfpI
scnpilot_expt_750_bf_scaffold_3360_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15108..15431)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3H0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82082.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
Displaying 16 items

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