ggKbase home page

scnpilot_expt_750_bf_scaffold_2791

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2791_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..616)
DNA (615bp) protein (205aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Pyruvate dehydrogenase E1 component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE11_9GAMM
pyruvate dehydrogenase E1 component, homodimeric type
scnpilot_expt_750_bf_scaffold_2791_2
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(722..1411)
DNA (690bp) protein (230aa)
Methyltransferase type 11 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M1B7_METRJ
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACB26092.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacte
scnpilot_expt_750_bf_scaffold_2791_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1546..3870)
DNA (2325bp) protein (775aa)
malic enzyme (EC:1.1.1.40)
Malic enzyme {ECO:0000313|EMBL:AIF46730.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AIF46730.1};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.
malic enzyme n=1 Tax=Dyella japonica RepID=UPI00031B3A3C rbh
scnpilot_expt_750_bf_scaffold_2791_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3941..5212)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM1_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90548.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_expt_750_bf_scaffold_2791_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5282..6337)
DNA (1056bp) protein (352aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthom
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1R3_9GAMM rbh
ribosome small subunit-dependent GTPase A
scnpilot_expt_750_bf_scaffold_2791_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6395..7657
DNA (1263bp) protein (421aa)
Aminotransferase AlaT {ECO:0000313|EMBL:EIL97706.1}; EC=2.6.1.2 {ECO:0000313|EMBL:EIL97706.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Aminotransferase AlaT n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE15_9GAMM rbh
aspartate/tyrosine/aromatic aminotransferase
scnpilot_expt_750_bf_scaffold_2791_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7667..8224
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE16_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97707.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
lysophospholipase L1-like esterase
scnpilot_expt_750_bf_scaffold_2791_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8287..8904
DNA (618bp) protein (206aa)
Glutaredoxin-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR52_9GAMM
Glutaredoxin-like protein {ECO:0000313|EMBL:EIL89693.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
monothiol glutaredoxin, Grx4 family
scnpilot_expt_750_bf_scaffold_2791_9
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9064..10917)
DNA (1854bp) protein (618aa)
SecC motif-containing protein id=2595769 bin=GWF1_Xanthomonadales_69_6 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
hypothetical protein Tax=GWF1_Xanthomonadales_69_6_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2791_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11078..12523)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5A580
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
TPR-repeat-containing protein
scnpilot_expt_750_bf_scaffold_2791_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12884..14350)
DNA (1467bp) protein (489aa)
Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NI38_9GAMM rbh
aspartyl/asparaginyl beta-hydroxylase-like dioxygenase
Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase {ECO:0000313|EMBL:AGG90554.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobac
scnpilot_expt_750_bf_scaffold_2791_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14592..15161
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000373DA56
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:AIF49480.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_2791_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15116..16081
DNA (966bp) protein (322aa)
Sulfotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE20_9GAMM
Sulfotransferase {ECO:0000313|EMBL:EIL97711.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxyd
tetratricopeptide repeat protein,sulfotransferase family protein
Displaying 13 items

View Taxonomy