name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_expt_750_bf_scaffold_1103_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..979
|
3-oxoacyl-(Acyl carrier protein) synthase I n=1 Tax=Rhodanobacter denitrificans RepID=I4WMV7_9GAMM
rbh
3-oxoacyl-(acyl-carrier-protein) synthase
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:AGG90817.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
|
|
scnpilot_expt_750_bf_scaffold_1103_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1676..2437
|
Glycosyl transferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMV9_9GAMM
rbh
glycosyl transferase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
glycosyl transferase
|
|
scnpilot_expt_750_bf_scaffold_1103_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2494..3255)
|
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWJ4_9GAMM
rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EIL91585.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
cAMP-binding protein
|
|
scnpilot_expt_750_bf_scaffold_1103_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3291..4709)
|
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
Coproporphyrinogen-III oxidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE57_9GAMM
rbh
oxygen-independent coproporphyrinogen III oxidase
|
|
scnpilot_expt_750_bf_scaffold_1103_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4965..5951)
|
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYU3_9GAMM
rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EIL92384.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
|
|
scnpilot_expt_750_bf_scaffold_1103_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5989..7281)
|
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:000025
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYU5_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_1103_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7427..7726)
|
Endonuclease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE60_9GAMM
Endonuclease {ECO:0000313|EMBL:EIL97751.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans
tRNA/rRNA methyltransferase
|
|
scnpilot_expt_750_bf_scaffold_1103_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7874..8968)
|
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYU6_9GAMM
rbh
4-hydroxyphenylpyruvate dioxygenase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
4-hydroxyphenylpyruvate dioxygenase
|
|
scnpilot_expt_750_bf_scaffold_1103_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9076..9537
|
MarR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE62_9GAMM
transcriptional regulator Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
transcriptional regulator
|
|
scnpilot_expt_750_bf_scaffold_1103_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9635..11143)
|
Amino acid/peptide transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKB6_9GAMM
rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:EIL99907.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
amino acid/peptide transporter (peptide:H symporter)
|
|
scnpilot_expt_750_bf_scaffold_1103_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11328..12830)
|
Amino acid/peptide transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE68_9GAMM
rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:EIL97759.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
amino acid/peptide transporter (peptide:H symporter)
|
|
scnpilot_expt_750_bf_scaffold_1103_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13008..13718
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F18891
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AIF45904.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
|
|
scnpilot_expt_750_bf_scaffold_1103_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13733..14236)
|
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMG2_9GAMM
tryptophan 2,3-dioxygenase (vermilion)
|
|
scnpilot_expt_750_bf_scaffold_1103_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14865..15950
|
Pyruvate dehydrogenase E1 alpha subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKB3_9GAMM
rbh
Pyruvate dehydrogenase E1 alpha subunit {ECO:0000313|EMBL:EIL99904.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
pyruvate dehydrogenase
|
|
scnpilot_expt_750_bf_scaffold_1103_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15954..16934
|
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYV2_9GAMM
rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit {ECO:0000313|EMBL:EIL92393.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
2-oxoisovalerate dehydrogenase
|
|
scnpilot_expt_750_bf_scaffold_1103_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17046..18362
|
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY8_9GAMM
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component {ECO:0000313|EMBL:AGG87698.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomona
|
|
scnpilot_expt_750_bf_scaffold_1103_17
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18834..19607
|
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B760E5
rbh
Membrane protein {ECO:0000313|EMBL:EZH73280.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical membrane protein
|
|
scnpilot_expt_750_bf_scaffold_1103_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19696..20340)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCZ3_9GAMM
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87697.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
|
|
scnpilot_expt_750_bf_scaffold_1103_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20343..20861)
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE74_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97765.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
putative metal-dependent hydrolase
|
|
scnpilot_expt_750_bf_scaffold_1103_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20940..23168)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYV9_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92400.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
|
|
scnpilot_expt_750_bf_scaffold_1103_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23331..23654)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMH1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87692.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
|
|
scnpilot_expt_750_bf_scaffold_1103_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23712..25073)
|
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE79_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_1103_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25180..26094)
|
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanob
arginase (EC:3.5.3.1)
Arginase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYW3_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_1103_24
unknown
|
Not on your lists |
comp(26582..26782)
|
This feature has no annotations |
|
scnpilot_expt_750_bf_scaffold_1103_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26883..27125)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87688.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
|
|
scnpilot_expt_750_bf_scaffold_1103_trna_1
unknown
|
Not on your lists |
comp(27296..27368)
|
transferRNA
|
|
scnpilot_expt_750_bf_scaffold_1103_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27406..28002)
|
Sporulation domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE84_9GAMM
Sporulation domain-containing protein {ECO:0000313|EMBL:EIL97775.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
sporulation related protein
|
|
scnpilot_expt_750_bf_scaffold_1103_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28035..28796)
|
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE85_9GAMM
rbh
pantothenate kinase, type III
|
|
scnpilot_expt_750_bf_scaffold_1103_28
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28793..29773)
|
Biotin-(Acetyl-CoA-carboxylase) ligase BirA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE86_9GAMM
birA, biotin-(acetyl-CoA-carboxylase) ligase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
birA, biotin-(acetyl-CoA-carboxylase) ligase
|
|
scnpilot_expt_750_bf_scaffold_1103_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29971..30288
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97778.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
|