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scnpilot_expt_750_bf_scaffold_1251

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1251_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1129)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344FA54 rbh
Alpha-mannosidase {ECO:0000313|EMBL:KGI78130.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
alpha-mannosidase
scnpilot_expt_750_bf_scaffold_1251_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1383..2582)
DNA (1200bp) protein (400aa)
N-acylglucosamine 2-epimerase n=1 Tax=Dyella ginsengisoli RepID=UPI0003488451 rbh
D-mannose isomerase {ECO:0000313|EMBL:EIL92289.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spath
N-acyl-D-glucosamine 2-epimerase
scnpilot_expt_750_bf_scaffold_1251_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2579..3571)
DNA (993bp) protein (331aa)
Sugar kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAQ9_9GAMM rbh
Sugar kinase {ECO:0000313|EMBL:EIL96550.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans
sugar kinase, ribokinase
scnpilot_expt_750_bf_scaffold_1251_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3561..4253)
DNA (693bp) protein (231aa)
L-fucose:H+ symporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK3_9GAMM
L-fucose:H+ symporter permease
L-fucose:H+ symporter permease {ECO:0000313|EMBL:AGG87851.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
scnpilot_expt_750_bf_scaffold_1251_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4955..7252
DNA (2298bp) protein (766aa)
Alpha-1,2-mannosidase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK2_9GAMM rbh
Alpha-1,2-mannosidase family protein {ECO:0000313|EMBL:EIL92293.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
alpha-1,2-mannosidase, putative
scnpilot_expt_750_bf_scaffold_1251_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7319..9115
DNA (1797bp) protein (599aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Putative two-component sensor histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXH2_9GAMM rbh
PAS domain S-box
scnpilot_expt_750_bf_scaffold_1251_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9112..9558
DNA (447bp) protein (149aa)
Two-component system regulatory protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAQ5_9GAMM
Two-component system regulatory protein {ECO:0000313|EMBL:EIL96546.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_expt_750_bf_scaffold_1251_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9635..11194
DNA (1560bp) protein (520aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK5_9GAMM rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EIL92296.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_1251_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11345..12739)
DNA (1395bp) protein (465aa)
Fis family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK6_9GAMM rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:EIL92297.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
scnpilot_expt_750_bf_scaffold_1251_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12831..14474)
DNA (1644bp) protein (548aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB98_9GAMM rbh
signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_1251_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14774..15451
DNA (678bp) protein (226aa)
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXG6_9GAMM
Displaying 11 items

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