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scnpilot_expt_750_bf_scaffold_1546

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1546_1
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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3..851
DNA (849bp) protein (283aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=GWE2_Bacteroidetes_32_14_curated
Ste24 endopeptidase (EC:3.4.24.84)
STE24 endopeptidase id=2574646 bin=GWF2_Bacteroidetes_33_16 species=Azospirillum amazonense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
scnpilot_expt_750_bf_scaffold_1546_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(899..1453)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY87_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89730.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_1546_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1547..2251)
DNA (705bp) protein (235aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF7_9GAMM">RepID=I4WPF7_9GAMM
Glutathione S-transferase {ECO:0000313|EMBL:EIM01349.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
glutathione S-transferase
scnpilot_expt_750_bf_scaffold_1546_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2314..2883)
DNA (570bp) protein (190aa)
aminotransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000345FC01 rbh
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EIL94054.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
nicotinamide mononucleotide transporter PnuC
scnpilot_expt_750_bf_scaffold_1546_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2880..5057)
DNA (2178bp) protein (726aa)
TonB-dependent siderophore receptor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZW8_9GAMM rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EIL92759.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
TonB-dependent siderophore receptor
scnpilot_expt_750_bf_scaffold_1546_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5206..6417)
DNA (1212bp) protein (404aa)
Putative homoserine kinase type II (Protein kinase fold) n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ57_9GAMM rbh
putative homoserine kinase type II (protein kinase fold)
Putative homoserine kinase type II (Protein kinase fold) {ECO:0000313|EMBL:AGG89723.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanob
scnpilot_expt_750_bf_scaffold_1546_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6475..7419
DNA (945bp) protein (315aa)
Putative permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WY94_9GAMM rbh
Putative permease {ECO:0000313|EMBL:EIM03091.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxy
putative permease
scnpilot_expt_750_bf_scaffold_1546_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7501..8091
DNA (591bp) protein (197aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY95_9GAMM
response regulator containing a CheY-like receiver domain and a GGDEF domain Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
response regulator containing a CheY-like receiver domain and a GGDEF domain
scnpilot_expt_750_bf_scaffold_1546_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8097..8489
DNA (393bp) protein (131aa)
Ribosome-associated heat shock protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY96_9GAMM
ribosome-associated heat shock protein implicated in recycling of 50S subunit
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_1546_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8600..9211
DNA (612bp) protein (204aa)
Response regulator receiver n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W452_9GAMM
Response regulator receiver {ECO:0000313|EMBL:EIL94243.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_expt_750_bf_scaffold_1546_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9224..10870)
DNA (1647bp) protein (549aa)
DNA mismatch repair protein MutS n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUF4_9GAMM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
DNA mismatch repair protein MutS
scnpilot_expt_750_bf_scaffold_1546_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10852..11685)
DNA (834bp) protein (278aa)
DNA mismatch repair protein MutS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W449_9GAMM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
DNA mismatch repair protein MutS
scnpilot_expt_750_bf_scaffold_1546_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11843..13030)
DNA (1188bp) protein (396aa)
Undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W073_9GAMM
Undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase {ECO:0000313|EMBL:EIL92864.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
UDP-phosphate N-acetylglucosaminyl-1-phosphate transferase
scnpilot_expt_750_bf_scaffold_1546_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13207..13677)
DNA (471bp) protein (157aa)
Putative polysaccharide export protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W865_9GAMM
Putative polysaccharide export protein {ECO:0000313|EMBL:EIL95656.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
capsular biosynthesis protein
scnpilot_expt_750_bf_scaffold_1546_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15043..15870
DNA (828bp) protein (276aa)
wzc; Tyrosine-protein kinase wzc (EC:2.7.10.-)
Capsular exopolysaccharide family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W868_9GAMM
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:EIL95659.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
Displaying 15 items

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