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scnpilot_expt_750_bf_scaffold_1590

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1590_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIT8_9GAMM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGG89583.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
scnpilot_expt_750_bf_scaffold_1590_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

632..2188
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPZ4_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KGI76739.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1590_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2565..2804
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WEC9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89582.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_expt_750_bf_scaffold_1590_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2810..2986
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0I1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92972.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
scnpilot_expt_750_bf_scaffold_1590_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3005..3580)
DNA (576bp) protein (192aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA5_9GAMM rbh
Putative transmembrane protein {ECO:0000313|EMBL:EIL97446.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
hypothetical protein
scnpilot_expt_750_bf_scaffold_1590_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3577..4194)
DNA (618bp) protein (206aa)
Electron transport protein SCO1/SenC n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW8_9GAMM rbh
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:AGG89573.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteri
scnpilot_expt_750_bf_scaffold_1590_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4166..5653)
DNA (1488bp) protein (496aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NHL2_9GAMM rbh
heme/copper-type cytochrome/quinol oxidase, subunit 1
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:AGG89572.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
scnpilot_expt_750_bf_scaffold_1590_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5650..6198)
DNA (549bp) protein (183aa)
Cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA2_9GAMM rbh
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIL97443.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
heme/copper-type cytochrome/quinol oxidase, subunit 2
scnpilot_expt_750_bf_scaffold_1590_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6402..6815)
DNA (414bp) protein (138aa)
OsmC-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA1_9GAMM
OsmC-like protein {ECO:0000313|EMBL:EIL97442.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxy
putative redox protein, regulator of disulfide bond formation
scnpilot_expt_750_bf_scaffold_1590_10
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6839..8071)
DNA (1233bp) protein (411aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFG0_9GAMM
acyl-CoA dehydrogenase Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
acyl-CoA dehydrogenase
scnpilot_expt_750_bf_scaffold_1590_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8064..8534)
DNA (471bp) protein (157aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4B1_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIL94302.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp
acyl-CoA dehydrogenase
scnpilot_expt_750_bf_scaffold_1590_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8657..9421
DNA (765bp) protein (255aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4B0_9GAMM rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94301.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
diguanylate cyclase/phosphodiesterase (GGDEF EAL domains)
scnpilot_expt_750_bf_scaffold_1590_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9460..9723
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95547.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
DnaK suppressor protein
scnpilot_expt_750_bf_scaffold_1590_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10274..11356)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD96_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97437.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
putative permease
scnpilot_expt_750_bf_scaffold_1590_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11573..12112)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0V3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93094.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_expt_750_bf_scaffold_1590_16
unknown

Not on your lists

12425..12712
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1590_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12807..14297)
DNA (1491bp) protein (497aa)
Periplasmic glycine betaine/choline-binding (Lipo)protein of an ABC-type transport system (Osmoprotectant binding protein) n=1 Tax=Rhodanobacter denitrificans RepID=M4NIS0_9GAMM rbh
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
scnpilot_expt_750_bf_scaffold_1590_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14294..15061)
DNA (768bp) protein (256aa)
ABC-type proline/glycine betaine transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NHK3_9GAMM rbh
ABC-type proline/glycine betaine transport system, ATPase component
ABC-type proline/glycine betaine transport system, ATPase component {ECO:0000313|EMBL:AGG89562.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
scnpilot_expt_750_bf_scaffold_1590_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15110..16351)
DNA (1242bp) protein (414aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4A3_9GAMM rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94294.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
diguanylate cyclase/phosphodiesterase
scnpilot_expt_750_bf_scaffold_1590_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16404..17615)
DNA (1212bp) protein (404aa)
Metal-dependent phosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4A2_9GAMM rbh
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:EIL94293.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
metal-dependent phosphohydrolase
scnpilot_expt_750_bf_scaffold_1590_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17773..18243
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4A1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94292.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1590_22
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18256..18780
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000376AB6C
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:AFU99214.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 1
scnpilot_expt_750_bf_scaffold_1590_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18749..19384)
DNA (636bp) protein (212aa)
Bacterial lipocalin n=1 Tax=Rhodanobacter denitrificans RepID=I4WWV1_9GAMM rbh
bacterial lipocalin
Bacterial lipocalin {ECO:0000313|EMBL:AGG89557.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
scnpilot_expt_750_bf_scaffold_1590_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19797..20723
DNA (927bp) protein (309aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W495_9GAMM rbh
ABC transporter-like protein {ECO:0000313|EMBL:EIL94286.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
ABC-type multidrug transport system, ATPase component
scnpilot_expt_750_bf_scaffold_1590_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20720..21481
DNA (762bp) protein (254aa)
Putative ABC transporter inner membrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD86_9GAMM rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
hypothetical protein
Displaying 25 items

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