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scnpilot_expt_750_bf_scaffold_1596

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1596_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..377)
DNA (375bp) protein (125aa)
Methylmalonyl-CoA mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H6_9GAMM
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EIL94367.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
methylmalonyl-CoA mutase, N-terminal domain/subunit
scnpilot_expt_750_bf_scaffold_1596_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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643..1479
DNA (837bp) protein (279aa)
TonB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMN0_9GAMM
TonB family protein {ECO:0000313|EMBL:EIM00722.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thioo
outer membrane transport energization protein TonB
scnpilot_expt_750_bf_scaffold_1596_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1571..2476)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94368.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
lysophospholipase
scnpilot_expt_750_bf_scaffold_1596_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2487..3089)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDP9_9GAMM rbh
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EIL97590.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
transcriptional regulator
scnpilot_expt_750_bf_scaffold_1596_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3195..3977
DNA (783bp) protein (261aa)
Peptidase M48 Ste24p n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDQ0_9GAMM
Peptidase M48 Ste24p {ECO:0000313|EMBL:EIL97591.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thio
Peptidase family M48
scnpilot_expt_750_bf_scaffold_1596_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4066..4401
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4I0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94371.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1596_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4615..5718
DNA (1104bp) protein (368aa)
Leucine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y1_9GAMM rbh
Leucine dehydrogenase {ECO:0000313|EMBL:EIL94172.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spa
glutamate dehydrogenase/leucine dehydrogenase
scnpilot_expt_750_bf_scaffold_1596_8
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5777..6151)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037B8FCD
Uncharacterized protein {ECO:0000313|EMBL:KGM57772.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenici
diguanylate cyclase
scnpilot_expt_750_bf_scaffold_1596_9
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6142..6867)
DNA (726bp) protein (242aa)
diguanylate cyclase Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
diguanylate cyclase id=12551769 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
diguanylate cyclase
scnpilot_expt_750_bf_scaffold_1596_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7112..8668
DNA (1557bp) protein (519aa)
Phospholipase D/transphosphatidylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPN8_9GAMM rbh
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:AGG89646.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonad
scnpilot_expt_750_bf_scaffold_1596_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8732..9889
DNA (1158bp) protein (386aa)
Isovaleryl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y3_9GAMM rbh
isovaleryl-CoA dehydrogenase
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AIF47543.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A
scnpilot_expt_750_bf_scaffold_1596_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9970..12816)
DNA (2847bp) protein (949aa)
Autotransporter serine protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WPP0_9GAMM rbh
autotransporter-associated beta strand repeat protein
Autotransporter-associated beta strand repeat protein {ECO:0000313|EMBL:AGG89648.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
scnpilot_expt_750_bf_scaffold_1596_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13056..14240
DNA (1185bp) protein (395aa)
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFL6_9GAMM rbh
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGG89649.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
scnpilot_expt_750_bf_scaffold_1596_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14398..14823
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Z5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94186.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1596_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14884..14970)
DNA (87bp) protein (29aa)
Transposase family protein {ECO:0000313|EMBL:AGG88472.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
Displaying 15 items

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