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scnpilot_expt_750_bf_scaffold_1616

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1616_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217..1824
DNA (1608bp) protein (536aa)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Z6_9GAMM rbh
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:EIL94187.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
scnpilot_expt_750_bf_scaffold_1616_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1840..2919)
DNA (1080bp) protein (360aa)
GTPase Obg n=1 Tax=Rhodanobacter denitrificans RepID=M4NPU6_9GAMM rbh
Obg family GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomon
scnpilot_expt_750_bf_scaffold_1616_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3092..3349)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Rhodanobacter fulvus Jip2 PF1_9GAMM">RepID=I4VPF1_9GAMM
ribosomal protein L27 Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ribosomal protein L27
scnpilot_expt_750_bf_scaffold_1616_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3369..3683)
DNA (315bp) protein (105aa)
50S ribosomal protein L21 n=1 Tax=Rhodanobacter denitrificans RepID=I4WPQ1_9GAMM
ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
scnpilot_expt_750_bf_scaffold_1616_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3815..4264)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W404_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1616_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4928..7252
DNA (2325bp) protein (775aa)
UvrABC system protein A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB01_9GAMM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
Excinuclease ABC subunit A
scnpilot_expt_750_bf_scaffold_1616_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7249..7695
DNA (447bp) protein (149aa)
Thioesterase superfamily protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WPQ4_9GAMM
putative thioesterase
Putative thioesterase {ECO:0000313|EMBL:AGG89661.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
scnpilot_expt_750_bf_scaffold_1616_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7703..8374
DNA (672bp) protein (224aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhodanobacter denitrificans RepID=M4NHT6_9GAMM rbh
DNA-binding domain-containing protein, AraC-type
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AGG89662.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
scnpilot_expt_750_bf_scaffold_1616_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8251..8811)
DNA (561bp) protein (187aa)
GNAT family acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB03_9GAMM
acetyltransferase, N-acetylglutamate synthase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
acetyltransferase, N-acetylglutamate synthase
scnpilot_expt_750_bf_scaffold_1616_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8960..10414
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WPQ7_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89664.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_1616_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10431..11195
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB05_9GAMM rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EIL96646.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
enoyl-CoA hydratase/carnithine racemase
scnpilot_expt_750_bf_scaffold_1616_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11252..12106)
DNA (855bp) protein (285aa)
Rhodanese-related sulfurtransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPE4_9GAMM rbh
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EIL89085.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
sulfurtransferase
scnpilot_expt_750_bf_scaffold_1616_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12103..12696)
DNA (594bp) protein (198aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPR0_9GAMM
NTP pyrophosphohydrolase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
NUDIX hydrolase
scnpilot_expt_750_bf_scaffold_1616_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12917..13699)
DNA (783bp) protein (261aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHT9_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_expt_750_bf_scaffold_1616_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13728..14510
DNA (783bp) protein (261aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W412_9GAMM
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EIL94203.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
enoyl-CoA hydratase
scnpilot_expt_750_bf_scaffold_1616_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14531..14995)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAN9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96530.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
Displaying 16 items

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