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scnpilot_expt_750_bf_scaffold_1686

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1686_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1215
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRT9_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90261.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_1686_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1215..2588
DNA (1374bp) protein (458aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLZ8_9GAMM rbh
scnpilot_expt_750_bf_scaffold_1686_3
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2599..3039)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3VEI2_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EPG74905.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BU
scnpilot_expt_750_bf_scaffold_1686_4
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3068..3553)
DNA (486bp) protein (162aa)
Putative activator of Hsp90 ATPase homologue 1-like n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WAH7_RALSL
Putative activator of Hsp90 ATPase homologue 1-like {ECO:0000313|EMBL:CCF96798.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1686_5
unknown

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comp(3608..4099)
DNA (492bp) protein (164aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1686_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4096..4368)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IAK4_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD69536.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM
hypothetical protein
scnpilot_expt_750_bf_scaffold_1686_7
unknown

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4718..5011
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1686_8
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4936..5283)
DNA (348bp) protein (116aa)
Regulatory protein ArsR n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JBP7_FRASU
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADP81067.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_expt_750_bf_scaffold_1686_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5787..6725
DNA (939bp) protein (313aa)
Xylanase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4M7_9GAMM rbh
Xylanase {ECO:0000313|EMBL:EIL94418.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39
esterase/lipase
scnpilot_expt_750_bf_scaffold_1686_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7028..7999
DNA (972bp) protein (324aa)
Voltage-gated potassium channel beta subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WZA3_9GAMM rbh
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AGG87950.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
scnpilot_expt_750_bf_scaffold_1686_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8085..8285
DNA (201bp) protein (67aa)
Hemin uptake protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZA2_9GAMM
hemin uptake protein
Hemin uptake protein {ECO:0000313|EMBL:AGG87951.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
scnpilot_expt_750_bf_scaffold_1686_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8288..8722
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00036836E9
Uncharacterized protein {ECO:0000313|EMBL:EIL90573.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1686_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8997..10268
DNA (1272bp) protein (424aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ53_9GAMM rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL87244.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
RND family efflux transporter, MFP subunit
scnpilot_expt_750_bf_scaffold_1686_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10396..11106
DNA (711bp) protein (237aa)
Antimicrobial peptide ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSG3_9GAMM rbh
Antimicrobial peptide ABC transporter ATPase {ECO:0000313|EMBL:EIL90154.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
ABC-type antimicrobial peptide transport system, ATPase component
scnpilot_expt_750_bf_scaffold_1686_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11178..12488
DNA (1311bp) protein (437aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ68_9GAMM rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL99509.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_expt_750_bf_scaffold_1686_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12499..13740
DNA (1242bp) protein (414aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NEN4_9GAMM rbh
ABC-type antimicrobial peptide transport system, permease component
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87973.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
scnpilot_expt_750_bf_scaffold_1686_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13858..15174
DNA (1317bp) protein (439aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKU4_9GAMM rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL87835.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_expt_750_bf_scaffold_1686_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15265..16521
DNA (1257bp) protein (419aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJM0_9GAMM rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL99661.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_expt_750_bf_scaffold_1686_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16638..19055
DNA (2418bp) protein (806aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL8_9GAMM rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL99659.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_expt_750_bf_scaffold_1686_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19198..20520
DNA (1323bp) protein (441aa)
ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ75_9GAMM rbh
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHX12151.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jia
scnpilot_expt_750_bf_scaffold_1686_21
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20607..21818
DNA (1212bp) protein (404aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NEN8_9GAMM rbh
ABC-type antimicrobial peptide transport system, permease component Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
ABC-type antimicrobial peptide transport system, permease component
scnpilot_expt_750_bf_scaffold_1686_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21999..23825
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEP1_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87983.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_1686_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23997..24914
DNA (918bp) protein (306aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL4_9GAMM
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIL99655.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Displaying 23 items

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