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scnpilot_expt_750_bf_scaffold_1995

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1995_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..2279)
DNA (2277bp) protein (759aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL26_9GAMM rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIL87917.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodano
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_expt_750_bf_scaffold_1995_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2363..3607)
DNA (1245bp) protein (415aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NCU4_9GAMM rbh
RND family efflux transporter, MFP subunit Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
RND family efflux transporter, MFP subunit
scnpilot_expt_750_bf_scaffold_1995_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3752..4735
DNA (984bp) protein (328aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ4_9GAMM rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87259.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
scnpilot_expt_750_bf_scaffold_1995_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4909..5706)
DNA (798bp) protein (266aa)
Undecaprenyl-diphosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU39_9GAMM rbh
putative bacitracin resistance protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative bacitracin resistance protein
scnpilot_expt_750_bf_scaffold_1995_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6178..6639
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87738.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
pirin
scnpilot_expt_750_bf_scaffold_1995_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6913..7620
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU38_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90729.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1995_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7617..7955
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ7_9GAMM
nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AGG87262.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
scnpilot_expt_750_bf_scaffold_1995_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8073..9386
DNA (1314bp) protein (438aa)
Ammonium transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NCU8_9GAMM rbh
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
scnpilot_expt_750_bf_scaffold_1995_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9564..10973
DNA (1410bp) protein (470aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU35_9GAMM rbh
scnpilot_expt_750_bf_scaffold_1995_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11031..11432)
DNA (402bp) protein (134aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS3_9GAMM
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AGG87276.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter deni
scnpilot_expt_750_bf_scaffold_1995_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11639..12250)
DNA (612bp) protein (204aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRX5_9GAMM rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIL89966.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
putative NADH-flavin reductase
scnpilot_expt_750_bf_scaffold_1995_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12373..13167
DNA (795bp) protein (265aa)
Dioxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRX6_9GAMM rbh
Dioxygenase {ECO:0000313|EMBL:EIL89967.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli
hypothetical protein
scnpilot_expt_750_bf_scaffold_1995_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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13243..13428
DNA (186bp) protein (62aa)
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ82_PSEUX
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:AEA23932.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocard
scnpilot_expt_750_bf_scaffold_1995_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13432..14226)
DNA (795bp) protein (265aa)
ectoine/hydroxyectoine ABC transporter ATP-binding protein (EC:3.6.3.30)
Ectoine/hydroxyectoine ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEA23931.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AEA23931.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales
Ectoine/hydroxyectoine ABC transporter, ATP-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ81_PSEUX rbh
scnpilot_expt_750_bf_scaffold_1995_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14213..14809)
DNA (597bp) protein (199aa)
Ectoine/hydroxyectoine ABC transporter, permease protein EhuD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ80_PSEUX rbh
ectoine/hydroxyectoine ABC transporter permease EhuD
Ectoine/hydroxyectoine ABC transporter, permease protein EhuD {ECO:0000313|EMBL:AEA23930.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
Displaying 15 items

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