name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_expt_750_bf_scaffold_893_1 |
Not on your lists |
3..122
|
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase oxidoreductase n=1 Tax=mine drainage metagenome RepID=T0ZJW3_9ZZZZ
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EQD64787.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
|
|
scnpilot_expt_750_bf_scaffold_893_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
222..1358
|
Diguanylate cyclase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK89_9GAMM
rbh
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG90721.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
|
|
scnpilot_expt_750_bf_scaffold_893_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1396..2949)
|
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=666685 species="Bacteria; Proteobacter
Threonine dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK90_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2946..3194)
|
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AGG90719.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AGG90719.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xan
Acetolactate synthase, small subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WK91_9GAMM
|
|
scnpilot_expt_750_bf_scaffold_893_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3259..5121)
|
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX5_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5171..5512)
|
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
|
|
scnpilot_expt_750_bf_scaffold_893_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5581..6591)
|
ketol-acid reductoisomerase (EC:1.1.1.86) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKV8_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6588..8300)
|
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=M4NTA0_9GAMM
rbh
dihydroxyacid dehydratase/phosphogluconate dehydratase
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8625..9722)
|
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK95_9GAMM
rbh
3-isopropylmalate dehydrogenase
|
|
scnpilot_expt_750_bf_scaffold_893_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9719..10300)
|
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX9_9GAMM
rbh
3-isopropylmalate dehydratase, small subunit Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
3-isopropylmalate dehydratase, small subunit
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10440..11852)
|
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCE4_9GAMM
rbh
3-isopropylmalate dehydratase, large subunit
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11849..12844)
|
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched chain amino acid aminotransferase apoenzyme {ECO:0000313|EMBL:AGG90712.1}; EC=2.6.1.42 {ECO:0000313|EMBL:AGG90712.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xan
Branched chain amino acid aminotransferase apoenzyme n=1 Tax=Rhodanobacter denitrificans RepID=M4NKV3_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12841..14463)
|
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C2_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14880..17384)
|
Uncharacterized protein n=1 Tax=Pseudomonas putida NBRC 14164 RepID=T2H725_PSEPU
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
|
|
scnpilot_expt_750_bf_scaffold_893_15
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17377..17721)
|
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
scnpilot_expt_750_bf_scaffold_893_16
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18722..19555
|
hypothetical protein n=1 Tax=Xanthomonas vasicola RepID=UPI0001CC02A2
Uncharacterized protein {ECO:0000313|EMBL:KFA30025.1}; TaxID=1094180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasic
|
|
scnpilot_expt_750_bf_scaffold_893_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19666..21408)
|
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSD3_9GAMM
rbh
|
|
scnpilot_expt_750_bf_scaffold_893_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21559..21828)
|
phosphocarrier protein HPr n=1 Tax=Dyella japonica RepID=UPI0002D524AE
phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:AIF47139.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.
|
|
scnpilot_expt_750_bf_scaffold_893_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21837..22229)
|
Phosphotransferase system, mannose/fructose-specific component IIA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T2_9GAMM
phosphotransferase system, mannose/fructose-specific component IIA Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
phosphotransferase system, mannose/fructose-specific component IIA
|
|
scnpilot_expt_750_bf_scaffold_893_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22264..23166)
|
UPF0042 nucleotide-binding protein UU7_04297 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T3_9GAMM
rbh
Nucleotide-binding protein UU7_04297 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
putative P-loop-containing kinase
|
|
scnpilot_expt_750_bf_scaffold_893_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23171..24073)
|
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
serine kinase of the HPr protein, regulates carbohydrate metabolism (EC:2.7.1.-)
HPr kinase/phosphorylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSD7_9GAMM
|
|
scnpilot_expt_750_bf_scaffold_893_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24279..24602)
|
Ribosomal subunit interface protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR04_9GAMM
ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:AGG90210.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
|
|
scnpilot_expt_750_bf_scaffold_893_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24758..26245)
|
RNA polymerase sigma-54 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WR03_9GAMM
rbh
RNA polymerase, sigma 54 subunit, RpoN/SigL
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
|
|
scnpilot_expt_750_bf_scaffold_893_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26295..27014)
|
ABC transporter ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR02_9GAMM
rbh
ABC-type (unclassified) transport system, ATPase component
ABC-type (Unclassified) transport system, ATPase component {ECO:0000313|EMBL:AGG90208.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodan
|
|
scnpilot_expt_750_bf_scaffold_893_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27019..27585)
|
Lipopolysaccharide transport periplasmic protein LptA n=2 Tax=Rhodanobacter denitrificans RepID=M4NJC6_9GAMM
lipopolysaccharide transport periplasmic protein LptA
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:AGG90207.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
|
|
scnpilot_expt_750_bf_scaffold_893_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27539..28216)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94480.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
|
|
scnpilot_expt_750_bf_scaffold_893_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28213..28764)
|
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQZ9_9GAMM
rbh
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:AGG90205.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
|
|
scnpilot_expt_750_bf_scaffold_893_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28831..29841)
|
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1163409 species="Bacteria; Proteobacter
Arabinose 5-phosphate isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE4_9GAMM
rbh
KpsF/GutQ family protein
|
|
scnpilot_expt_750_bf_scaffold_893_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29997..30236
|
BolA superfamily transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE5_9GAMM
putative transcriptional regulator, BolA superfamily
BolA superfamily transcriptional regulator {ECO:0000313|EMBL:EIM02387.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
|
|
scnpilot_expt_750_bf_scaffold_893_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30329..31588
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE6_9GAMM
rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
|