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scnpilot_expt_750_bf_scaffold_911

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_911_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..684
DNA (684bp) protein (228aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLA9_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL88000.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
cation/multidrug efflux pump
scnpilot_expt_750_bf_scaffold_911_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3217..3735)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DM78_9GAMM
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_expt_750_bf_scaffold_911_3
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4754..5419)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DM79_9GAMM
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_expt_750_bf_scaffold_911_4
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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5670..5912
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CGW3_ALCDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEZ75619.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera
scnpilot_expt_750_bf_scaffold_911_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7220..8236
DNA (1017bp) protein (339aa)
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC:6.4.1.4)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCX6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89117.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
scnpilot_expt_750_bf_scaffold_911_6
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8471..9256
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCX8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIG08612.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. M
hypothetical protein
scnpilot_expt_750_bf_scaffold_911_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9742..10965
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CLV2_XANCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL09145.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
scnpilot_expt_750_bf_scaffold_911_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11001..11567)
DNA (567bp) protein (189aa)
CRISPR-associated Csy4 family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPH5_9GAMM
CRISPR-associated Csy4 family protein {ECO:0000313|EMBL:EIL89116.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
csy4; CRISPR-associated protein, Csy4 family
scnpilot_expt_750_bf_scaffold_911_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11572..12597)
DNA (1026bp) protein (342aa)
Crispr-associated protein, Csy3 family n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPH4_9GAMM rbh
Crispr-associated protein, Csy3 family {ECO:0000313|EMBL:EIL89115.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
CRISPR-associated protein Csy3 family
scnpilot_expt_750_bf_scaffold_911_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12617..12856)
DNA (240bp) protein (80aa)
CRISPR-associated protein Csy2 family n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPH3_9GAMM
CRISPR-associated protein Csy2 family {ECO:0000313|EMBL:EIL89114.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
CRISPR-associated protein Csy2 family
scnpilot_expt_750_bf_scaffold_911_11
unknown

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13218..13535
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_911_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13559..14038)
DNA (480bp) protein (160aa)
Crispr-associated protein, Csy1 family n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPH2_9GAMM
Crispr-associated protein, Csy1 family {ECO:0000313|EMBL:EIL89113.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
csy; crispr-associated protein, Csy1 family
scnpilot_expt_750_bf_scaffold_911_13
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13989..14888)
DNA (900bp) protein (300aa)
Probable crispr-associated protein, csy1 family n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UGL6_XANAP rbh
CRISPR-associated protein Csy1 family
Probable crispr-associated protein, csy1 family {ECO:0000313|EMBL:CBA17527.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" so
scnpilot_expt_750_bf_scaffold_911_14

Not on your lists

15031..15285
DNA (255bp) protein (85aa)
Plasmid stability protein n=2 Tax=mine drainage metagenome RepID=T1AFA1_9ZZZZ
Plasmid stability protein {ECO:0000313|EMBL:EQD59166.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
plasmid stability protein
scnpilot_expt_750_bf_scaffold_911_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15282..15473
DNA (192bp) protein (64aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Rhodanobacter denitrificans RepID=I4WW25_9GAMM
putative nucleic acid-binding protein, contains PIN domain
scnpilot_expt_750_bf_scaffold_911_16
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15581..19006)
DNA (3426bp) protein (1142aa)
CRISPR-associated helicase Cas3 family n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FIJ2_9XANT rbh
CRISPR-associated helicase Cas3 family {ECO:0000313|EMBL:ENZ96953.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xa
crispr-associated helicase Cas3
scnpilot_expt_750_bf_scaffold_911_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19003..19998)
DNA (996bp) protein (332aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonada
CRISPR-associated endonuclease Cas1 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPG8_9GAMM rbh
cas; crispr-associated protein Cas1
scnpilot_expt_750_bf_scaffold_911_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20221..20505
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93734.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
LysM domain-containing protein
scnpilot_expt_750_bf_scaffold_911_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20763..21293
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93735.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_911_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21529..23754
DNA (2226bp) protein (742aa)
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P6_9GAMM rbh
isocitrate dehydrogenase, NADP-dependent, monomeric type Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
isocitrate dehydrogenase, NADP-dependent, monomeric type
scnpilot_expt_750_bf_scaffold_911_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23773..24717)
DNA (945bp) protein (315aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPI3_9GAMM rbh
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EIL89124.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
scnpilot_expt_750_bf_scaffold_911_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24820..25017)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIR1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90794.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_expt_750_bf_scaffold_911_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25126..26046
DNA (921bp) protein (307aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NMB2_9GAMM rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG90793.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
scnpilot_expt_750_bf_scaffold_911_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26120..27232
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthom
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFC2_9GAMM rbh
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
scnpilot_expt_750_bf_scaffold_911_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27467..28426
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS1_9GAMM rbh
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGG90790.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
scnpilot_expt_750_bf_scaffold_911_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28450..28986
DNA (537bp) protein (179aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
pseudouridine synthase family protein (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFC5_9GAMM rbh
scnpilot_expt_750_bf_scaffold_911_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29048..29845)
DNA (798bp) protein (266aa)
preprotein translocase subunit TatD n=1 Tax=Dyella japonica RepID=UPI000372700C rbh
preprotein translocase subunit TatD
Mg-dependent DNase {ECO:0000313|EMBL:EIL89134.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus
scnpilot_expt_750_bf_scaffold_911_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30051..31439
DNA (1389bp) protein (463aa)
Peptidase M4, thermolysin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQB5_9GAMM rbh
Peptidase M4, thermolysin {ECO:0000313|EMBL:EIL89406.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
Zinc metalloprotease (elastase)
Displaying 28 items

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