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scnpilot_expt_750_bf_scaffold_3768

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3768_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..3240
DNA (3240bp) protein (1080aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V subunit beta n=1 Tax=Rhodanobacter sp. 115 RepID=I4W828_9GAMM rbh
exodeoxyribonuclease V subunit beta
scnpilot_expt_750_bf_scaffold_3768_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3230..3991
DNA (762bp) protein (254aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V subunit alpha n=1 Tax=Rhodanobacter sp. 115 RepID=I4W827_9GAMM
exodeoxyribonuclease V subunit alpha
scnpilot_expt_750_bf_scaffold_3768_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4006..5127
DNA (1122bp) protein (374aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME0_9GAMM
exodeoxyribonuclease V subunit alpha
scnpilot_expt_750_bf_scaffold_3768_4
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5345..5623
DNA (279bp) protein (93aa)
HigB toxin protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX11_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGM53023.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
Plasmid maintenance system killer
scnpilot_expt_750_bf_scaffold_3768_5

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5638..5922
DNA (285bp) protein (95aa)
Addiction module antidote protein, HigA n=1 Tax=mine drainage metagenome RepID=T1BNN4_9ZZZZ
Addiction module antidote protein, HigA {ECO:0000313|EMBL:EQD74461.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
addiction module, antitoxin
scnpilot_expt_750_bf_scaffold_3768_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6264..6845)
DNA (582bp) protein (194aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4L3_FRAAD
signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:AHX12645.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
scnpilot_expt_750_bf_scaffold_3768_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6851..7297)
DNA (447bp) protein (149aa)
Type 4 fimbrial biogenesis protein PilE n=1 Tax=mine drainage metagenome RepID=T1CY83_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX12644.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_expt_750_bf_scaffold_3768_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7287..8480)
DNA (1194bp) protein (398aa)
Type 4 fimbrial biogenesis protein PilY1 n=1 Tax=mine drainage metagenome RepID=T0Z274_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16112.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
Displaying 8 items

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