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scnpilot_expt_750_bf_scaffold_2055

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2055_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..742)
DNA (741bp) protein (247aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1162282 species="Bacteri
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAY4_9GAMM
scnpilot_expt_750_bf_scaffold_2055_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(739..1293)
DNA (555bp) protein (185aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammap
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ54_9GAMM
scnpilot_expt_750_bf_scaffold_2055_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1463..2296
DNA (834bp) protein (278aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDQ4_9GAMM rbh
nucleoside-diphosphate-sugar epimerase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
nucleoside-diphosphate-sugar epimerase
scnpilot_expt_750_bf_scaffold_2055_4

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2329..2676
DNA (348bp) protein (116aa)
Protein belonging to Uncharacterized protein family UPF0145 n=1 Tax=mine drainage metagenome RepID=T1ANG1_9ZZZZ
Protein belonging to Uncharacterized protein family UPF0145 {ECO:0000313|EMBL:EQD43585.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage me
hypothetical protein
scnpilot_expt_750_bf_scaffold_2055_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2693..3532)
DNA (840bp) protein (280aa)
Putative kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJJ3_9GAMM
putative kinase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative kinase
scnpilot_expt_750_bf_scaffold_2055_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3669..4256
DNA (588bp) protein (196aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate
Pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZK7_9GAMM rbh
scnpilot_expt_750_bf_scaffold_2055_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4323..5999)
DNA (1677bp) protein (559aa)
betA; choline dehydrogenase (EC:1.1.99.1)
Oxygen-dependent choline dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00750}; Short=CDH {ECO:0000255|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000255|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000255|HAMAP-Rul
Oxygen-dependent choline dehydrogenase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=BETA_STRMK rbh
scnpilot_expt_750_bf_scaffold_2055_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6056..7201)
DNA (1146bp) protein (382aa)
NAD/NADP-dependent betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00804}; Short=BADH {ECO:0000256|HAMAP-Rule:MF_00804};; EC=1.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00804};; TaxID=1333853 species
NAD/NADP-dependent betaine aldehyde dehydrogenase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L8E9_STEMA rbh
betB; betaine aldehyde dehydrogenase
Displaying 8 items

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