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scnpilot_expt_750_bf_scaffold_2894

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2894_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1580)
DNA (1578bp) protein (526aa)
Zn-dependent oligopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WE52_9GAMM
Zn-dependent oligopeptidase {ECO:0000313|EMBL:EIL97743.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
Zn-dependent oligopeptidase
scnpilot_expt_750_bf_scaffold_2894_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1684..3405
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EC5E42 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46397.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_2894_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3556..4086
DNA (531bp) protein (177aa)
Transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLU6_9GAMM rbh
Transferase {ECO:0000313|EMBL:EIL88187.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
scnpilot_expt_750_bf_scaffold_2894_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4093..4647)
DNA (555bp) protein (185aa)
TonB protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Z2_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2894_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4766..6427)
DNA (1662bp) protein (554aa)
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Z3_9GAMM rbh
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase {ECO:0000313|EMBL:KJV37399.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lutei
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
scnpilot_expt_750_bf_scaffold_2894_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6602..7429)
DNA (828bp) protein (276aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD9_9GAMM
shikimate dehydrogenase
scnpilot_expt_750_bf_scaffold_2894_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7555..7791
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDP0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97581.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_2894_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7967..9451)
DNA (1485bp) protein (495aa)
Glutathione synthase/ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD5_9GAMM rbh
Glutathione synthase/ribosomal protein S6 modification protein {ECO:0000313|EMBL:EIL90826.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)
scnpilot_expt_750_bf_scaffold_2894_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9692..10120
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FD6A5B
GCN5 family acetyltransferase
GCN5 family acetyltransferase {ECO:0000313|EMBL:AIF46387.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
scnpilot_expt_750_bf_scaffold_2894_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10398..11087)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT2_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2894_11
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11214..11399
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L318_FRAAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC84816.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="F
scnpilot_expt_750_bf_scaffold_2894_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11410..12243
DNA (834bp) protein (278aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUH3_9GAMM
scnpilot_expt_750_bf_scaffold_2894_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12313..12999
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96921.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_expt_750_bf_scaffold_2894_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13010..13885
DNA (876bp) protein (292aa)
tyrosine recombinase XerC n=1 Tax=Dyella japonica RepID=UPI0002F8098E rbh
recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
Displaying 14 items

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