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scnpilot_expt_750_bf_scaffold_1656

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1656_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..167
DNA (165bp) protein (55aa)
MarR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQW4_9GAMM
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:EIL89605.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
scnpilot_expt_750_bf_scaffold_1656_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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172..2268
DNA (2097bp) protein (699aa)
Fusaric acid resistance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQW5_9GAMM rbh
Fusaric acid resistance protein {ECO:0000313|EMBL:EIL89606.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
fusaric acid resistance protein rbh
scnpilot_expt_750_bf_scaffold_1656_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2258..2458
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQW6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89607.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1656_4
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2652..3683
DNA (1032bp) protein (344aa)
Multidrug resistance efflux pump n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L0D5_FRAAD rbh
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AFC87430.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;"
scnpilot_expt_750_bf_scaffold_1656_5
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3680..5140
DNA (1461bp) protein (487aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L316_FRAAD rbh
NodT family efflux transporter outer membrane lipoprotein
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:AFC84814.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
scnpilot_expt_750_bf_scaffold_1656_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5188..6588
DNA (1401bp) protein (467aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLV4_9GAMM
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_expt_750_bf_scaffold_1656_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6598..7194)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347CF60 rbh
GCN5 family acetyltransferase
GCN5 family acetyltransferase {ECO:0000313|EMBL:AHX15072.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangning
scnpilot_expt_750_bf_scaffold_1656_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7206..7412)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W773_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95314.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
uncharacterized conserved small protein containing a coiled-coil domain
scnpilot_expt_750_bf_scaffold_1656_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7513..8331
DNA (819bp) protein (273aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Dyella ginsengisoli RepID=UPI00037A9704 rbh
tRNA 2-thiocytidine biosynthesis protein TtcA
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" sour
scnpilot_expt_750_bf_scaffold_1656_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8663..9535
DNA (873bp) protein (291aa)
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:EIL96190.1}; EC=2.6.1.57 {ECO:0000313|EMBL:EIL96190.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
Aromatic amino acid aminotransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9P9_9GAMM
aspartate/tyrosine/aromatic aminotransferase
scnpilot_expt_750_bf_scaffold_1656_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9682..10599
DNA (918bp) protein (306aa)
Recombination-associated protein RdgC n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Q0_9GAMM rbh
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomon
DNA recombination-dependent growth factor C
scnpilot_expt_750_bf_scaffold_1656_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10731..11501
DNA (771bp) protein (257aa)
Putative metal-dependent hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCU8_9GAMM rbh
Putative metal-dependent hydrolase {ECO:0000313|EMBL:EIL97289.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
putative metal-dependent hydrolase
scnpilot_expt_750_bf_scaffold_1656_13
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11443..12663)
DNA (1221bp) protein (407aa)
ABC transporter permease (Fragment) n=3 Tax=mine drainage metagenome RepID=T1B9Q2_9ZZZZ
ABC-type antimicrobial peptide transport system, permease component Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
ABC-type antimicrobial peptide transport system, permease component
Displaying 13 items

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