ggKbase home page

scnpilot_expt_750_bf_scaffold_1657

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1657_1
unknown

Not on your lists

comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1657_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187..1827
DNA (1641bp) protein (547aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3L6_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EIL94057.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphyl
beta-lactamase
scnpilot_expt_750_bf_scaffold_1657_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2033..3304
DNA (1272bp) protein (424aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhodanobacter denitrificans RepID=M4NGU4_9GAMM rbh
penicillin-binding protein, beta-lactamase class C
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AGG89317.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
scnpilot_expt_750_bf_scaffold_1657_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3399..5084)
DNA (1686bp) protein (562aa)
ABC transporter ATP-binding protein n=1 Tax=Dyella japonica RepID=UPI0003167AD8
ABC transporter
ABC transporter {ECO:0000313|EMBL:AHX13610.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_expt_750_bf_scaffold_1657_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5166..6266)
DNA (1101bp) protein (367aa)
Acyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUS7_9GAMM rbh
Acyltransferase {ECO:0000313|EMBL:EIL90968.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;
acyltransferase
scnpilot_expt_750_bf_scaffold_1657_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6405..7037)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUS6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX13609.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_expt_750_bf_scaffold_1657_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7090..7845
DNA (756bp) protein (252aa)
Lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W115_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIL93156.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;
hypothetical protein
scnpilot_expt_750_bf_scaffold_1657_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7924..9354)
DNA (1431bp) protein (477aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W711_9GAMM rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIL95252.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp
NAD-dependent aldehyde dehydrogenase
scnpilot_expt_750_bf_scaffold_1657_9
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9541..10092)
DNA (552bp) protein (184aa)
TetR-family transcriptional regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8H9_AROAE
TetR family transcriptional regulator
TetR-family transcriptional regulator {ECO:0000313|EMBL:CAI06380.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleu
scnpilot_expt_750_bf_scaffold_1657_10
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10209..11420
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8I0_AROAE rbh
Glycosyl transferase {ECO:0000313|EMBL:KIF81055.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1657_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11957..12412
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Vibrio nigripulchritudo SOn1 RepID=U4JQ71_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KGJ96636.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
scnpilot_expt_750_bf_scaffold_1657_12
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12409..13329
DNA (921bp) protein (307aa)
hypothetical protein ; K11418 histone deacetylase 11 [EC:3.5.1.98] Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
Acetoin utilization protein AcuC n=1 Tax=Pseudoalteromonas sp. BSi20495 RepID=G7G3Z1_9GAMM rbh
histone deacetylase superfamily protein
scnpilot_expt_750_bf_scaffold_1657_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13360..14655)
DNA (1296bp) protein (432aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEY6_9GAMM rbh
scnpilot_expt_750_bf_scaffold_1657_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14734..16197)
DNA (1464bp) protein (488aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NES6_9GAMM rbh
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:AGG89304.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
scnpilot_expt_750_bf_scaffold_1657_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16221..18134
DNA (1914bp) protein (638aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK14_9GAMM rbh
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:EIL99805.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
hypothetical protein
Displaying 15 items

View Taxonomy