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scnpilot_expt_750_bf_scaffold_1879

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1879_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25..444)
DNA (420bp) protein (140aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF80_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_expt_750_bf_scaffold_1879_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(489..2354)
DNA (1866bp) protein (622aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
Nuclease-like protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF78_9GAMM rbh
nuclease-like protein
scnpilot_expt_750_bf_scaffold_1879_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2514..3098
DNA (585bp) protein (195aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPZ3_9GAMM
hypothetical protein
Diguanylate cyclase {ECO:0000313|EMBL:EIL89284.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvu
scnpilot_expt_750_bf_scaffold_1879_4
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3148..3546)
DNA (399bp) protein (133aa)
permease n=1 Tax=Acidovorax avenae RepID=UPI00035DACEF
Tax=RBG_13_Deltaproteobacteria_53_10_curated
scnpilot_expt_750_bf_scaffold_1879_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3954..4964
DNA (1011bp) protein (337aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NC94_9GAMM
scnpilot_expt_750_bf_scaffold_1879_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5000..5275
DNA (276bp) protein (92aa)
Acetyltransferase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N7_9GAMM
Acetyltransferase-like protein {ECO:0000313|EMBL:EIL94778.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
acetyltransferase
scnpilot_expt_750_bf_scaffold_1879_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5272..5943
DNA (672bp) protein (224aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG8_9GAMM rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88298.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
scnpilot_expt_750_bf_scaffold_1879_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6218..6700)
DNA (483bp) protein (161aa)
nucleotide-binding protein n=1 Tax=Dyella japonica RepID=UPI00031DB931
nucleotide-binding protein
UPF0234 protein HY57_17975 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
scnpilot_expt_750_bf_scaffold_1879_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6884..8062
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF72_9GAMM rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF48995.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_1879_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8066..8530)
DNA (465bp) protein (155aa)
UPF0178 protein UU5_04144 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF71_9GAMM
UPF0178 protein UU5_04144 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
hypothetical protein
scnpilot_expt_750_bf_scaffold_1879_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8527..9408)
DNA (882bp) protein (294aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF70_9GAMM rbh
Phenazine biosynthesis protein PhzF family protein {ECO:0000313|EMBL:EIL98111.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
phenazine biosynthesis protein PhzF family
scnpilot_expt_750_bf_scaffold_1879_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9436..10137
DNA (702bp) protein (234aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY55_9GAMM rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89762.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
scnpilot_expt_750_bf_scaffold_1879_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10220..10639
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF66_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98107.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1879_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10680..11690
DNA (1011bp) protein (337aa)
Putative aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU1_9GAMM
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AGG89759.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
Displaying 14 items

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