ggKbase home page

scnpilot_expt_750_bf_scaffold_974

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_974_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..275)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQW3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89604.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_974_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370..3252)
DNA (2883bp) protein (961aa)
peptidase M16 n=1 Tax=Dyella japonica RepID=UPI00037E9BFF rbh
Peptidase M16 {ECO:0000313|EMBL:AIF46535.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
peptidase M16
scnpilot_expt_750_bf_scaffold_974_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3514..3732
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NT33_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90651.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_974_4
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3768..3968
DNA (201bp) protein (67aa)
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_expt_750_bf_scaffold_974_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4018..4485
DNA (468bp) protein (156aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQW0_9GAMM
putative rRNA methylase SpoU family
scnpilot_expt_750_bf_scaffold_974_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4537..5214
DNA (678bp) protein (226aa)
sterol-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034655B4 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90653.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_974_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5211..6860
DNA (1650bp) protein (550aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Putative ubiquinone biosynthesis protein UbiB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W782_9GAMM
scnpilot_expt_750_bf_scaffold_974_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6875..7606
DNA (732bp) protein (244aa)
23S RNA-specific pseudouridylate synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSJ9_9GAMM rbh
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:EIM02441.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_974_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7744..8166
DNA (423bp) protein (141aa)
peptidyl-tRNA hydrolase n=1 Tax=Dyella japonica RepID=UPI000315522A
peptidyl-tRNA hydrolase
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:AHX15086.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_expt_750_bf_scaffold_974_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8163..8756
DNA (594bp) protein (198aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR85_9GAMM
acyltransferase
Acyltransferase {ECO:0000313|EMBL:AHX15087.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_expt_750_bf_scaffold_974_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8761..9390
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031E56D9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46526.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_974_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9635..10447
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00035CCC95
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX15044.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_expt_750_bf_scaffold_974_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10658..11707)
DNA (1050bp) protein (350aa)
Transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF41_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL98082.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
transcriptional regulator
scnpilot_expt_750_bf_scaffold_974_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11824..13422
DNA (1599bp) protein (533aa)
malate synthase (EC:2.3.3.9)
Malate synthase {ECO:0000313|EMBL:EIM02436.1}; EC=2.3.3.9 {ECO:0000313|EMBL:EIM02436.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
Malate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJW8_9GAMM
scnpilot_expt_750_bf_scaffold_974_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13445..14740
DNA (1296bp) protein (432aa)
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJW7_9GAMM
Isocitrate lyase {ECO:0000313|EMBL:EIM02435.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.
Displaying 15 items

View Taxonomy