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scnpilot_expt_750_bf_scaffold_983

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_983_1
unknown

Not on your lists

3..338
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_983_2
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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328..1050
DNA (723bp) protein (241aa)
Methyltransferase type 11 n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SWD9_NATMM
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADD03731.1}; Type 11 methyltransferase {ECO:0000313|EMBL:ELY33786.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbacea
scnpilot_expt_750_bf_scaffold_983_3
unknown

Not on your lists

1047..2162
DNA (1116bp) protein (372aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_983_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2181..3347
DNA (1167bp) protein (389aa)
Group 1 glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN10_9GAMM
Group 1 glycosyl transferase {ECO:0000313|EMBL:EIL88601.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
glycosyl transferase family 1
scnpilot_expt_750_bf_scaffold_983_5
unknown

Not on your lists

3633..3869
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_983_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3978..4508
DNA (531bp) protein (177aa)
CinA domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W448_9GAMM rbh
CinA domain-containing protein {ECO:0000313|EMBL:EIL94239.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
competence/damage-inducible protein CinA-like protein
scnpilot_expt_750_bf_scaffold_983_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4575..5612
DNA (1038bp) protein (346aa)
Protein RecA n=1 Tax=Rhodanobacter denitrificans RepID=I4WYA7_9GAMM rbh
protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=666685 species="Bacteria; Proteobac
scnpilot_expt_750_bf_scaffold_983_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5848..6345
DNA (498bp) protein (166aa)
Regulatory protein RecX n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W446_9GAMM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
hypothetical protein
scnpilot_expt_750_bf_scaffold_983_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6425..9052
DNA (2628bp) protein (876aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W445_9GAMM rbh
scnpilot_expt_750_bf_scaffold_983_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9308..9511
DNA (204bp) protein (68aa)
Carbon storage regulator homolog n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB0_9GAMM
carbon storage regulator CsrA
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
scnpilot_expt_750_bf_scaffold_983_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10435..11163)
DNA (729bp) protein (243aa)
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylgluco
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHW6_9GAMM rbh
scnpilot_expt_750_bf_scaffold_983_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11169..11885)
DNA (717bp) protein (239aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Rhodanobacter denitrificans RepID=M4NPZ3_9GAMM rbh
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AGG89696.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
scnpilot_expt_750_bf_scaffold_983_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11970..13487)
DNA (1518bp) protein (506aa)
Exopolyphosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB3_9GAMM rbh
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:AGG89695.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitri
scnpilot_expt_750_bf_scaffold_983_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13549..15639)
DNA (2091bp) protein (697aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB4_9GAMM rbh
polyphosphate kinase 1
scnpilot_expt_750_bf_scaffold_983_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15709..17331)
DNA (1623bp) protein (541aa)
Putative Zn-dependent protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB7_9GAMM rbh
putative Zn-dependent protease Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative Zn-dependent protease
scnpilot_expt_750_bf_scaffold_983_16
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17677..17940
DNA (264bp) protein (88aa)
Glutaredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W436_9GAMM
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AHX12601.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_expt_750_bf_scaffold_983_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17937..18314
DNA (378bp) protein (126aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W435_9GAMM
alkylhydroperoxidase AhpD family core domain protein
scnpilot_expt_750_bf_scaffold_983_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18477..19490
DNA (1014bp) protein (338aa)
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC0_9GAMM rbh
isocitrate/isopropylmalate dehydrogenase
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:AGG89688.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
scnpilot_expt_750_bf_scaffold_983_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19660..20115)
DNA (456bp) protein (152aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
Alkylhydroperoxidase-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKE2_9GAMM
alkylhydroperoxidase AhpD family core domain protein
scnpilot_expt_750_bf_scaffold_983_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20153..21058)
DNA (906bp) protein (302aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC2_9GAMM rbh
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG89686.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
scnpilot_expt_750_bf_scaffold_983_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21116..22069)
DNA (954bp) protein (318aa)
Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAB2_9GAMM rbh
Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase {ECO:0000313|EMBL:EIL96403.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
aspartyl/asparaginyl beta-hydroxylase-like dioxygenase
scnpilot_expt_750_bf_scaffold_983_22
unknown

Not on your lists

comp(22172..22309)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_983_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22696..24078)
DNA (1383bp) protein (461aa)
PhoH family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W430_9GAMM rbh
PhoH family protein {ECO:0000313|EMBL:EIL94221.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spath
PhoH family protein
scnpilot_expt_750_bf_scaffold_983_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24107..24568)
DNA (462bp) protein (154aa)
Peroxiredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ25_9GAMM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGG89683.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrifican
scnpilot_expt_750_bf_scaffold_983_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24817..25389)
DNA (573bp) protein (191aa)
Glycine cleavage system regulatory protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHV3_9GAMM rbh
glycine cleavage system regulatory protein
Glycine cleavage system regulatory protein {ECO:0000313|EMBL:AGG89682.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
scnpilot_expt_750_bf_scaffold_983_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25518..26396
DNA (879bp) protein (293aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC7_9GAMM
scnpilot_expt_750_bf_scaffold_983_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26447..27043
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96663.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_expt_750_bf_scaffold_983_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27122..27445)
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W425_9GAMM
Ferredoxin {ECO:0000313|EMBL:EIL94216.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B
ferredoxin
scnpilot_expt_750_bf_scaffold_983_trna_1
unknown

Not on your lists

comp(27778..27850)
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_983_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28031..29380
DNA (1350bp) protein (450aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=666685 species="Bacteria; Proteobacteria;
Poly(A) polymerase I n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN8_9GAMM rbh
poly(A) polymerase
Displaying items 1-30 of 45 in total

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