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scnpilot_expt_750_bf_scaffold_5438

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_5438_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..2231)
DNA (2229bp) protein (743aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME1_9GAMM
exodeoxyribonuclease V subunit beta
scnpilot_expt_750_bf_scaffold_5438_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2228..2719)
DNA (492bp) protein (164aa)
Exodeoxyribonuclease V subunit gamma (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDW6_9GAMM
Exodeoxyribonuclease V subunit gamma {ECO:0000313|EMBL:EIL97657.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
exodeoxyribonuclease V subunit gamma
scnpilot_expt_750_bf_scaffold_5438_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2689..5634)
DNA (2946bp) protein (982aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V subunit gamma n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME2_9GAMM
exodeoxyribonuclease V subunit gamma
scnpilot_expt_750_bf_scaffold_5438_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5792..6169)
DNA (378bp) protein (126aa)
Lipoprotein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBJ6_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIL96837.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_5438_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6303..6539)
DNA (237bp) protein (79aa)
Putative signal peptide protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBJ7_9GAMM
Putative signal peptide protein {ECO:0000313|EMBL:EIL96838.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
hypothetical protein
scnpilot_expt_750_bf_scaffold_5438_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6667..7500)
DNA (834bp) protein (278aa)
Peptidase M48 Ste24p n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDQ0_9GAMM rbh
Peptidase M48 Ste24p {ECO:0000313|EMBL:EIL97591.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thio
Peptidase family M48
scnpilot_expt_750_bf_scaffold_5438_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7566..8171
DNA (606bp) protein (202aa)
Transcriptional regulator, TetR family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDP9_9GAMM
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EIL97590.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
transcriptional regulator
scnpilot_expt_750_bf_scaffold_5438_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8183..8821
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDP8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97589.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
lysophospholipase
scnpilot_expt_750_bf_scaffold_5438_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8761..9039
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94368.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_5438_10
unknown

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9188..9409
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_5438_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9458..10300)
DNA (843bp) protein (281aa)
TonB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMN0_9GAMM rbh
TonB family protein {ECO:0000313|EMBL:EIM00722.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thioo
outer membrane transport energization protein TonB
scnpilot_expt_750_bf_scaffold_5438_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10619..10921
DNA (303bp) protein (101aa)
Methylmalonyl-CoA mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H6_9GAMM
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EIL94367.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
methylmalonyl-CoA mutase, N-terminal domain/subunit
Displaying 12 items

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