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scnpilot_expt_750_bf_scaffold_3014

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3014_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..679
DNA (678bp) protein (226aa)
metallopeptidase n=1 Tax=Dyella japonica RepID=UPI00031AEC4E
metallopeptidase
Metallopeptidase {ECO:0000313|EMBL:AIF47435.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_3014_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

894..1280
DNA (387bp) protein (129aa)
Putative Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFC0_9GAMM
putative Fe-S oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EIM01634.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
scnpilot_expt_750_bf_scaffold_3014_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1320..2117)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPS6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89217.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
extradiol ring-cleavage dioxygenase
scnpilot_expt_750_bf_scaffold_3014_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2250..2471)
DNA (222bp) protein (74aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1162282 specie
ATP-dependent RNA helicase DeaD n=2 Tax=Rhodanobacter sp. 115 RepID=I4VPS5_9GAMM
RNA helicase
scnpilot_expt_750_bf_scaffold_3014_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4110..4859
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031D4611 rbh
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AIF47442.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_3014_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4861..5415
DNA (555bp) protein (185aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI84_9GAMM
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EIL86925.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;
alanine acetyltransferase
scnpilot_expt_750_bf_scaffold_3014_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5425..6699)
DNA (1275bp) protein (425aa)
RNA helicase n=1 Tax=Dyella ginsengisoli RepID=UPI00034BECAD
RNA helicase
RNA helicase {ECO:0000313|EMBL:AIF47446.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_3014_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6849..7421)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKX4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00116.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
scnpilot_expt_750_bf_scaffold_3014_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7560..8795
DNA (1236bp) protein (412aa)
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKX3_9GAMM rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIM00115.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
arabinose efflux permease family protein
scnpilot_expt_750_bf_scaffold_3014_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8833..9318
DNA (486bp) protein (162aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKX2_9GAMM rbh
peptidylprolyl isomerase
scnpilot_expt_750_bf_scaffold_3014_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9563..10123)
DNA (561bp) protein (187aa)
Cell wall-associated hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI8_9GAMM
hydrolase
Hydrolase {ECO:0000313|EMBL:AHX12443.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_expt_750_bf_scaffold_3014_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10199..11425)
DNA (1227bp) protein (409aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFD1_9GAMM rbh
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG88318.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitr
scnpilot_expt_750_bf_scaffold_3014_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11427..11813)
DNA (387bp) protein (129aa)
CopY family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WTJ0_9GAMM
putative transcriptional regulator Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative transcriptional regulator
scnpilot_expt_750_bf_scaffold_3014_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11884..12969)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA7_9GAMM rbh
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3014_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13221..14480
DNA (1260bp) protein (420aa)
D-amino acid dehydrogenase subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKW5_9GAMM rbh
amino acid dehydrogenase
Amino acid dehydrogenase {ECO:0000313|EMBL:AHX12445.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis
scnpilot_expt_750_bf_scaffold_3014_16
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14751..15008
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DE1EE4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47457.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_3014_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15245..15676)
DNA (432bp) protein (144aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFD6_9GAMM
putative translation initiation inhibitor, yjgF family
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:AGG88323.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobac
scnpilot_expt_750_bf_scaffold_3014_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15673..16335)
DNA (663bp) protein (221aa)
Carbonic anhydrase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5R3_9GAMM
carbonic anhydrase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
carbonic anhydrase
scnpilot_expt_750_bf_scaffold_3014_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16346..17665)
DNA (1320bp) protein (440aa)
2-aminomuconic semialdehyde dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKV5_9GAMM
2-aminomuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:EIM00097.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
NAD-dependent aldehyde dehydrogenase
scnpilot_expt_750_bf_scaffold_3014_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17871..18659)
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA1_9GAMM
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:EIL88692.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
short-chain dehydrogenase
scnpilot_expt_750_bf_scaffold_3014_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18691..19005)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88691.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_expt_750_bf_scaffold_3014_22
unknown

Not on your lists

comp(19008..19130)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 22 items

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